Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq2061 80.6 7e-11 >seq2061 Length=1175 Score = 80.6 bits (88), Expect = 7e-11 Identities = 128/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 11114 GCGCGATTTGATAGCGACAAAGAGTACGAGGTTGGCGAAGTCGGTTTTTACCTAGCCAGC 11173 |||| |||||| ||||| || || ||| ||||||| ||||||||||||| ||||| Sbjct 478 GCGCTGTTTGATGGCGACGGTGAATATGAGATTGGCGAGTTCGGTTTTTACCTCGCCAGT 419 Query 11174 GGCACGCTGCTGGCTGTGTTTTCCGCACCGAATACCACGCTGACGTATAAGAGC-CAGTA 11232 || || ||||||| |||| ||||| || | |||||||||||| ||| | Sbjct 418 GGGACCTTGCTGGCGGTGTATTCCGTGGCGGGGAAGTTGCTGACGTATAA-AGCGGCGGC 360 Query 11233 CTCGCACTGGCTGCAGCGCTTCACGCTGGATCTGACACCGCTGCCCAGCGAGAGCGTGAC 11292 ||| ||||||| |||||||||||| | | ||| |||| || |||||||| Sbjct 359 GGCGCGGGTGCTGCAGAAGTTCACGCTGGATATTTCGCCGTTGCCGGCGGATAGCGTGAC 300 Query 11293 G 11293 | Sbjct 299 G 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125456418188010