Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3385 96.9 3e-15 >seq3385 Length=38424 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| || || || || | |||| |||||||| || |||||||||||||| || Sbjct 14358 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTT 14417 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || || ||||| || || | ||| | | ||||||| || || || || | ||||| Sbjct 14418 GTCCTGGATTTTCTGCTTAACATTTTCGATGCTGTCGGACGATTCCACCTCCAAAGTAAT 14477 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | ||| ||||||||||| ||||| Sbjct 14478 GGTCTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 14513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451980515089400