Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3385 109 6e-19 >seq3385 Length=38424 Score = 109 bits (120), Expect = 6e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 ||||||| ||||||||||| || || | || | || || ||||||||||| || || | Sbjct 14324 CCTTTTGAATATTGTAGTCCGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 14383 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| || ||||| || | ||| | || ||||||||| ||| |||| ||| | | Sbjct 14384 TCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTT 14443 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| ||||||||| |||| || ||||| ||||| |||| || || |||| Sbjct 14444 CGATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 46584 AGATTTGCAT 46593 | || ||||| Sbjct 14504 AAATCTGCAT 14513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565210032097800