Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3385 82.4 5e-11 >seq3385 Length=38424 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 39532 TTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATT 39591 ||||| ||||| || || | | | ||| |||| |||| || || || |||| || Sbjct 14326 TTTTGAATATTGTAGTCCGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATC 14385 Query 39592 AAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCG 39649 | ||| ||||| || | || | |||||| ||||| ||||| || |||| | ||| Sbjct 14386 AGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTTCG 14445 Query 39650 CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGA 39709 | |||| | | |||||| ||||||||||| || || || || ||||| ||||| | Sbjct 14446 ATGCTGT--CGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 39710 AGATCTGCATG 39720 | ||||||||| Sbjct 14504 AAATCTGCATG 14514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347352602228495