Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3637 84.2 3e-11 seq3606 84.2 3e-11 >seq3637 Length=22692 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 154714 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAG 154773 |||||||| |||| || | || || || || || ||||||||||||||||| ||||| | Sbjct 17164 ATGTATGTCTGATTCCGGTATCGGCCCACGGCACAAATCCTGCTAGTGCTGTTATGGCTG 17105 Query 154774 GGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819 | ||||| ||||| | ||| |||| ||||| | ||||| || || Sbjct 17104 GTATGAAGGTTGTGGTTGTAAAGTCGGATGAGAACGGTAATATTGA 17059 >seq3606 Length=160506 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 154714 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAG 154773 |||||||| |||| || | || || || || || ||||||||||||||||| ||||| | Sbjct 145366 ATGTATGTCTGATTCCGGTATCGGCCCACGGCACAAATCCTGCTAGTGCTGTTATGGCTG 145307 Query 154774 GGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819 | ||||| ||||| | ||| |||| ||||| | ||||| || || Sbjct 145306 GTATGAAGGTTGTGGTTGTAAAGTCGGATGAGAACGGTAATATTGA 145261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579183730757600