Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq2439 98.7 3e-16 >seq2439 Length=1004 Score = 98.7 bits (108), Expect = 3e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 33600 TGGGATGGCACGTTTAAATGGGCGTGGACGGATAACCCGGCCTGGGTGTTTTACGACCTG 33659 ||||| ||||| ||||| ||| ||||| || ||||| | |||| || |||||| | Sbjct 191 TGGGACGGCACCTTTAAGCAGGCCTGGACCGACAACCCTGTCTGGATGACCTACGACATT 132 Query 33660 GTGATCACTGATCGCTTCGGACTCGGCGACCGGCTGGACGCCGATAACG-TGGACAAATG 33718 ||| |||| ||||| || || ||| || | | |||| | | |||||||||| Sbjct 131 ACCATCGCTGACCGCTTTGGCCTGGGCCGTCGCATCAA-GCCGTGGATGGTGGACAAATG 73 Query 33719 GGCGCTCTACCAGGTGGCGCAATACTGCGATCAGATGGTGCCGGACGGCAGGGGCGGC 33776 || ||| |||| | | ||||||||||||| ||| ||||||||||||| | ||| ||| Sbjct 72 GGAGCTGTACCGGATTTCGCAATACTGCGACCAGTTGGTGCCGGACGGGAAGGGTGGC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127789106964480