Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq3385 127 2e-24 >seq3385 Length=38424 Score = 127 bits (140), Expect = 2e-24 Identities = 144/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGG--CATCGTCCAATTGCTTACCTGCAAATA 101339 ||||| |||||||| || ||| || | | |||| |||| ||||| || ||||| | Sbjct 14326 TTTTGAATATTGTAGTC--CGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 14383 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 ||| ||| || || || |||||||||||||| || || || ||||| || || ||| ||| Sbjct 14384 TCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTT 14443 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||| |||| |||||| || | ||| | || ||||| || ||||| ||||||| Sbjct 14444 CGATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 101460 ATATCTGCATG 101470 | ||||||||| Sbjct 14504 AAATCTGCATG 14514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396259008983355