Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq1576 196 1e-45 >seq1576 Length=1476 Score = 196 bits (216), Expect = 1e-45 Identities = 316/451 (70%), Gaps = 5/451 (1%) Strand=Plus/Minus Query 22737 ATGTGGGCGTCATC-AGCATTCGAGAAAAAAGGCCGGACGGTTCTTGGTCAATGCGAAGA 22795 ||||||||||| || ||| |||| || | || |||| || || || || ||| | Sbjct 520 ATGTGGGCGTCGTCGAGC-TTCGCCAAGCATGGTAGGACAGTCCTGGGCCAGGCCGAGCA 462 Query 22796 AGTGATGATGCGTGCTGGTGGATGGCAAAAGTCGAGAATGGAACAGCAGATGCATGAATG 22855 |||| | | || |||||||| ||||| || | | |||||||||||||||| ||| || Sbjct 461 AGTGGGGTTCCGCGCTGGTGGCTGGCAGAAAGCCCGGATGGAACAGCAGATGCGTGATTG 402 Query 22856 GTTCGGGAGAATCCCAGCATTCATTATCACGCTGGCCGCTGACTATTGCGCGGAGTGCTC 22915 |||||| | || || ||||| ||||| || || || ||||| ||||| ||||| Sbjct 401 GTTCGGCGACGTGCCGGCCTTCATCATCACCCTAGCTGCGGACTACTGCGCTCAGTGCAG 342 Query 22916 CGACTTGGATTTCTGCGCGCTGGTAGAACATGAGCTTTACCACATTTGCCACGCTACTGA 22975 |||| || ||||| || ||||| || |||||||| || ||||| ||| || | || Sbjct 341 CGACACCGACTTCTGTGCCCTGGTTGAGCATGAGCTCTATCACATCGCCCATGCCATGGA 282 Query 22976 TGAATTCGGTGCTCCGAAATTTAAACGGGATACCGGATTGCCGGTGCTGAAAATGCGCGG 23035 | | | |||| || ||||| |||| || | || ||| | |||||| Sbjct 281 TAAGTACGGTCAGCCAGCATTTACCAAGGATGGCGCA---CCCAAGCTTGAGATGCGCTC 225 Query 23036 TCACGATGTTGAGGAATTCGTTGGCGTCGTTCGCCGCTACGGTGCAAGCCGTGACGTGCA 23095 |||||||| ||||| ||||||||||| || ||||||||||||||||||| |||||| || Sbjct 224 ACACGATGTCGAGGAGTTCGTTGGCGTGGTCCGCCGCTACGGTGCAAGCCCTGACGTTCA 165 Query 23096 GGAAATGGTTGATGCGGCAAACAATAGGCCGGAAGTGGCTCACGTCGATGTGGCGAGGGC 23155 | |||| ||||| ||||||| | | || |||| | | | | ||||||| Sbjct 164 AGCGTTGGTGGATGCTGCAAACAGTCCTGCCGAGGTGGGGAAATTGAACATATCGAGGGC 105 Query 23156 ATGCGGAACGTGCTTATTAAAATTGGCGTGA 23186 |||||||| || | | | |||||| ||| Sbjct 104 CTGCGGAACCTGTCTGCTCAGATTGGCCTGA 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154923813170880