Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3385 87.8 4e-12 >seq3385 Length=38424 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || ||||| || || || | | ||| |||| |||| || || |||||||||| Sbjct 14325 CTTTTGA-ATATTGTAGTCCGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 14383 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | | || || ||||| || || ||||| || || || ||||| | || ||||| Sbjct 14384 TCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTT 14443 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 || || |||||||| || || | ||||||||| || || || || || || | || Sbjct 14444 CGATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 192527 ATATCTGCAT 192536 | |||||||| Sbjct 14504 AAATCTGCAT 14513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984429356195250