Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3385 122 8e-23 seq3939 87.8 2e-12 >seq3385 Length=38424 Score = 122 bits (134), Expect = 8e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||||||||| ||||| || | | || || | || ||||||||||| || ||||| | Sbjct 14324 CCTTTTGAATATTGTAGTCCGAAAGGGCACGTCCATCTTCCAGCTGCTTGCCAGCAAAGA 14383 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| || ||||| || | |||| || ||||||||| ||| || ||||| | | || Sbjct 14384 TCAGACGTTGCTGCTCAGGCGGAATGCCTTCCTTGTCCTGGATTTTCTGCTTAACATTTT 14443 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| |||||||||||||| || || || || || |||||||| || |||| Sbjct 14444 CGATGCTGTCGGACGATTCCACCTCCAAAGTAATGGTCTTGCCTGTCAAAGTCTTTACAA 14503 Query 35727 ATATCTGCAT 35736 | |||||||| Sbjct 14504 AAATCTGCAT 14513 >seq3939 Length=136313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || || || ||||||||| ||||||||||| ||| Sbjct 72396 CCACCACGAAGACGCARCACTAGGTGCAAAGTCGACTCCTTTTGGATGTTGTAATCCGCC 72337 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||||||||| || ||||| |||| || |||||||| | ||| Sbjct 72336 AAAGTACGGCCATCCTCCAGCTGCTTCCCAGCAAAGATCAGACGTTGCTGGTCAGGRGGA 72277 Query 35630 A 35630 | Sbjct 72276 A 72276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450770975796200