Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq1576 260 4e-65 >seq1576 Length=1476 Score = 260 bits (288), Expect = 4e-65 Identities = 401/566 (71%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 7045 CAATGAAGACCACGCCCACCTACAAGACGCT--CCTCTCGCTTTCCTATGGGCTGCCTCC 7102 ||| |||||||| |||||||||| || || | || ||| | | | ||||| | || Sbjct 563 CAACGAAGACCATGCCCACCTACTGGATGCGGACATC-CGCGT-CATGTGGGCGTCGTCG 506 Query 7103 AGCTTCACCAAGCAGGGGAGGACGGTACTGGGTCAGTGCGAAGAGGTGACGTTCCGCTGT 7162 |||||| ||||||| || ||||| || ||||| ||| ||| | ||| ||||||| | Sbjct 505 AGCTTCGCCAAGCATGGTAGGACAGTCCTGGGCCAGGCCGAGCAAGTGGGGTTCCGCGCT 446 Query 7163 GGAGCCTGGCAGAAGGGTAGGCAGGAACAGCAGATGATCCGTTGGTTCGGATACCTGCCG 7222 || | ||||||||| | || ||||||||||||| ||||||||| || ||||| Sbjct 445 GGTGGCTGGCAGAAAGCCCGGATGGAACAGCAGATGCGTGATTGGTTCGGCGACGTGCCG 386 Query 7223 AGGTTTCTGATCACCCTGGCTGCTGACTACTGCTCCCAGTGCTCCGACGCGGAGTTCTGC 7282 || | |||||||| ||||| ||||||||| | |||||| |||| | || ||||| Sbjct 385 GCCTTCATCATCACCCTAGCTGCGGACTACTGCGCTCAGTGCAGCGACACCGACTTCTGT 326 Query 7283 GCATTGGTCGAGCATGAGCTCTACCACATCTGCCAAGAGCACAACCAATATGGCGAGCCC 7342 || |||| |||||||||||||| |||||| ||| | | | || || |||| Sbjct 325 GCCCTGGTTGAGCATGAGCTCTATCACATCGCCCATGCCATGGATAAGTACGGTCAGCCA 266 Query 7343 AAGTTCACCGAGGAGGGCTTTCCAAAGCTGAAGCTCCGCGGGCATGACGTCGAGGAGTTC 7402 || ||| |||| ||| || ||||| || | ||| || || |||||||||||| Sbjct 265 GCATTTACCAAGGATGGCGCACCCAAGCTTGAGATGCGCTCACACGATGTCGAGGAGTTC 206 Query 7403 GTCGGCGTGGTGAGGCGGTACGGCCCAAGCAAGGACGTGCAGTATCTCATCGACGCTGCT 7462 || |||||||| | || ||||| ||||| ||||| || | | || ||||| Sbjct 205 GTTGGCGTGGTCCGCCGCTACGGTGCAAGCCCTGACGTTCAAGCGTTGGTGGATGCTGCA 146 Query 7463 AGCAGGCCTCCAGAGGTGGCCAAAATTAACATTTCGAGAGCCTGCGGTACGTGCCTGCTG 7522 | ||| ||| | ||||||| ||| | ||||| ||||| |||||||| || || ||||| Sbjct 145 AACAGTCCTGCCGAGGTGGGGAAATTGAACATATCGAGGGCCTGCGGAACCTGTCTGCTC 86 Query 7523 AAGTCGGCAT-AGCCACGACAGGCCCATGACAGGAAGAAAAACGATGGCAACCCTGAACA 7581 | | ||| | | || ||||| || | ||| |||| | | |||||| ||||||||| Sbjct 85 AGATTGGCCTGACCCCTGACAGACCTAAGAC-GGAATTTACCCTATGGCAGCCCTGAACA 27 Query 7582 GCGACGTGAAGGCGTTCATCGTTCAG 7607 || ||||| | ||||| |||||| Sbjct 26 ATGAGGTGAAAGGCTTCATGGTTCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156776524832850