Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_031081.1 Length=45206 Score E Sequences producing significant alignments: (Bits) Value seq2439 84.2 6e-12 >seq2439 Length=1004 Score = 84.2 bits (92), Expect = 6e-12 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 16741 CCACCGTTGCCGTCGCTGACCAACTGATCGCAGCGCTGCGCAATCTGGTAGAGCGCGTAT 16800 ||||| || ||||| |||||||| |||||| |||| |||| |||| ||| | || Sbjct 16 CCACCCTTCCCGTCCGGCACCAACTGGTCGCAGTATTGCGAAATCCGGTACAGCTCCCAT 75 Query 16801 CGGTTTAGCATTTGCGGTTTGATACGCCGACCGAGGCCGAAGCGCTCAGTAATACAAATA 16860 || | ||| ||| ||||| || || || ||||| ||||| |||| || ||| Sbjct 76 TTGTCCACCATCCACGGCTTGATGCGACGGCCCAGGCCAAAGCGGTCAGCGATGGTAATG 135 Query 16861 TCGTACCAGTGCCACGCAGGGTTATCCGTCCATGCGCGTTTAAACGTGCCGTCCCA 16916 ||||| ||| ||||||| || ||||| || | ||||| ||||||||||| Sbjct 136 TCGTAGGTCATCCAGACAGGGTTGTCGGTCCAGGCCTGCTTAAAGGTGCCGTCCCA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144530708718240