Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peronospora_20tabacina_20[genbank_20GCA_5F002099245.1_202017-04-18] 4,015 sequences; 63,065,868 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq1113 107 7e-19 >seq1113 Length=254142 Score = 107 bits (118), Expect = 7e-19 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 52080 TCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTC 52139 || ||||||||| || |||| || |||| ||||| ||| |||| ||||| | | | Sbjct 13235 TCAGCTTGGAATCCGGCTGATCTGAATGAAATGGCATTGCCTCCGTGCCACATGTTTTGT 13176 Query 52140 CAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATG 52199 || || || || || || | | | || |||||||| |||| || || || ||||| || Sbjct 13175 CAGTTTTACGTGGCGGATGATGAACTGTCGTGCCAGATGTACCAACGCTCGGCCGATATT 13116 Query 52200 TTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGA 52259 | ||||| |||||||| |||||||||||| | |||||||||| | || | || | | Sbjct 13115 GGACTAGGCGTGCCGTTTAATATTGCCAGCTATGCGTTGCTGACGCGTTTGGTCGCGCAA 13056 Query 52260 GCAGTTGGCCTTGATGTTGGTGAATTCAT 52288 | || || || | | ||| || ||||| Sbjct 13055 GTGGTAGGACTGAAAGCTGGCGAGTTCAT 13027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190086936579150