Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314435.1_202015- 10-14] 3,701 sequences; 37,340,450 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq450 122 7e-23 >seq450 Length=22763 Score = 122 bits (134), Expect = 7e-23 Identities = 215/312 (69%), Gaps = 1/312 (0%) Strand=Plus/Plus Query 20224 TTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAAC 20283 ||||| || |||||||| || || ||| | |||||||| || |||| |||||| | Sbjct 19717 TTGGG-CCGGTGTATGGGTTCCAGTGGCGCCATTTTGGTGCCAAATACACGGACATGCAT 19775 Query 20284 ACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACG 20343 | |||| || ||||| ||||||||| | | || ||| | | |||| Sbjct 19776 GCGGATTACACTGATCAAGGTGTAGATCAACTGGCTGAGGTGATTCACAAGCTGCGAACG 19835 Query 20344 AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATG 20403 ||||||| |||| | | || | | | ||||||||| || ||| | ||| Sbjct 19836 AACCCAACCGACCGCCGGATCGTACTTTCGGCCTGGAACCCTGCTGATCTCAACGAGATG 19895 Query 20404 GCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGT 20463 || |||| || || || ||| | || || |||||||||||| || || | |||||| Sbjct 19896 GCGCTGCCGCCCTGCCACATGTTCTGTCAGTTTTACGTTGCTGATGGAGAGCTATCGTGT 19955 Query 20464 CAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTAT 20523 || ||||| || || || ||||| |||||||| ||||| || ||||| ||||| || || Sbjct 19956 CAGATGTACCAGCGCTCTGCTGACATGGGACTTGGTGTGCCATTCAACATTGCCAGCTAC 20015 Query 20524 GCGCTGCTTACG 20535 |||||||| ||| Sbjct 20016 GCGCTGCTCACG 20027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399165994431445