Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314435.1_202015- 10-14] 3,701 sequences; 37,340,450 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq450 114 1e-20 >seq450 Length=22763 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 20216 TGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAA 20275 ||||| ||||| || ||| | || |||| || || || | || || | || | Sbjct 20074 TGAATGAACTCGCCAGGTTTCAGTCCAGCCACCTGCGCCACCAATCTCGTGAGCAGCGCG 20015 Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 |||||||||||||| || || || || | |||||||| | || | ||| |||| |||| Sbjct 20014 TAGCTGGCAATGTTGAATGGCACACCAAGTCCCATGTCAGCAGAGCGCTGGTACATCTGA 19955 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 || || ||||| || ||||| || ||||| ||||| |||| ||| |||||||| |||||| Sbjct 19954 CACGATAGCTCTCCATCAGCAACGTAAAACTGACAGAACATGTGGCAGGGCGGCAGCGCC 19895 Query 20396 ATCAACGACAAG-TCCGCCGGGTTCCACGC 20424 ||| || || || || |||||||| || Sbjct 19894 ATC-TCGTTGAGATCAGCAGGGTTCCAGGC 19866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441352380990840