Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq412 100 2e-16 >seq412 Length=22564 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || |||| ||| ||||||||||||||||| | || || |||| Sbjct 19936 ATGGCGCTGCCGCCCTGCCACATGTTCTGTCAGTTTTACGTTGCTGATGGAGAGCTATCG 19995 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| | || | || ||||| ||||| || || ||||||||||| | Sbjct 19996 TGTCAGATGTACCAGCGCTCTGCTGACATGGGACTTGGTGTGCCATTCAACATTGCCAGC 20055 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || || || || | || ||||| || | ||||| ||| | || || || ||| Sbjct 20056 TACGCGCTGCTCACGAGATTGGTGGCGCAGGTGGCTGGACTGAAACCTGGCGAGTTCATT 20115 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || || |||||| | || |||| || Sbjct 20116 CATGTTATTGGCGACGCACATGTGTATCTGAACCA 20150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399486038425005