Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq1330 84.2 3e-11 >seq1330 Length=14258 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 ||| || | ||||||||||||| |||||| ||| ||||||| ||| |||||||||||||| Sbjct 5896 GCCTCCGCCCGGGATTGAACCGGGGACCTTCTGTTTACAAGACAGATGCTCTACCACTGA 5955 Query 108075 GCTATAGAGGCGAAAT 108090 || | | ||||| ||| Sbjct 5956 GCCACACAGGCGCAAT 5971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746186389893360