Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq141 192 1e-43 seq674 172 1e-37 seq563 161 2e-34 seq1010 154 3e-32 seq414 150 3e-31 seq911 143 5e-29 seq688 120 6e-22 seq1812 89.7 9e-13 >seq141 Length=36708 Score = 192 bits (212), Expect = 1e-43 Identities = 612/932 (66%), Gaps = 19/932 (2%) Strand=Plus/Plus Query 9893 TTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATTCATGACG---CCCGCCTT 9949 ||||||||| ||||| | | ||||| | || ||||| | | || || ||||| Sbjct 14865 TTAGAAGTCCGCGTCCAGAGTGAACACCTGCTCTTCGGCCGCGACGCCGACACCAGCCTT 14924 Query 9950 CTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTC 10009 |||||| || || |||||||||||||| |||||||| || || || | || Sbjct 14925 GGAGTACTCGCCCACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATGTC 14984 Query 10010 CATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAAT 10069 ||| |||| || ||||||| | || | ||||| || || | || | Sbjct 14985 CATCCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACTCCCAGCGAGTAGAGCAG 15044 Query 10070 GCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATG-C 10128 ||||||||||||||||| |||||||||| ||| || ||||||||||||| || | | Sbjct 15045 ACGGTCAGCCACGAACTCAATGTACTGGCACATGAGCCCCGAGTTCATGCCGATGAGCTC 15104 Query 10129 GGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGC 10188 | ||||| | | ||||| | ||| || | ||| | | || || || ||||| | Sbjct 15105 GACAGGG-AGCGAGTCGCGCACGAACTCGTGCTCGATCACCACAGCGTCACGCACGAT-C 15162 Query 10189 TCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAA 10246 || | | || || || ||||||||| | ||||| || |||| ||| | || Sbjct 15163 TCGTGCACGCGGCTCTCCGG-CAGCTTGTTGACCAGCTTGGAGTACATGAGGCAGGCGAA 15221 Query 10247 CTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCAT 10306 | | ||| | ||||||||| |||||||||| |||||| || || | ||||| ||||| Sbjct 15222 GTCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTTAGACCAGGCAT 15281 Query 10307 GAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTC 10366 ||| || || || |||||||| |||| |||||| || || ||||| | | |||||| Sbjct 15282 GAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCCGAGAAGAAGATACCCTC 15341 Query 10367 CAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCGAAAAGTATTTC- 10424 ||| ||| | |||| | || || || | | |||| |||||| | | | Sbjct 15342 CACTGCAG-CAAAGGCCAGCAGCCGTTCCGGGTAGGACGACACGCGCGGGTCGCACCACT 15400 Query 10425 -GAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAG-AGC 10481 ||| ||||| || ||||| || ||||| ||||| || || || || || Sbjct 15401 TGAGCGCCCAGTTGGCTTTCTTCTGGACACACGGGATAGTCTCAATGGCA-CGCAGCAGG 15459 Query 10482 TTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTG 10541 | | | |||| ||||| || | |||| ||||| ||||| ||| | Sbjct 15460 TGGGTTTTCTCGACAATGTCCTTGATGTACGTGTCAATAAGCAGCGAGTACACCTCCGAG 15519 Query 10542 TGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACT 10601 |||| | |||| || |||| | ||||||| || ||| || | || Sbjct 15520 TGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGCACTTGCACC 15579 Query 10602 TCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAG 10661 || | | ||||| || || |||||| | || || ||||| ||| | ||||||||| Sbjct 15580 TCGTTGCTGAAGTTCATGGCCAAGTTCTCGTTGACTATACCATCACTGGCAGCAAAGAAG 15639 Query 10662 CCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACC 10721 | || | ||||||||||||||||||||| | || | || ||||| |||||| Sbjct 15640 GCCAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTGAG--GTTCAC-CCAGTCCTTG 15696 Query 10722 ACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTAC 10781 | || || ||| | | |||||| | |||||||| | || |||||||||||||| Sbjct 15697 AGGTCGTGCACGAGATCCAGCTCCTCGGCCGTCCAGAAGGAAGCCTCGGCCTTCTTGTAC 15756 Query 10782 ATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||||| | | |||| | | | | |||||||| Sbjct 15757 ATCTGCCACACGTCGTGCTCCTGAATGGGGAA 15788 >seq674 Length=22689 Score = 172 bits (190), Expect = 1e-37 Identities = 442/668 (66%), Gaps = 24/668 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||| Sbjct 15118 CGCCACTGGATGTACTGGTTGGCCGTCTCGTCGAGGTGCGACTCAATGTGGTGGAAAGCG 15059 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| ||| | || || Sbjct 15058 TGCTGAGCCACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGGCCGCTCGTGGGC 14999 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| ||||| | ||| || ||||| || || || | | Sbjct 14998 TCAACCTCACCCGTCAGCATCTTGATCAGCGTCGACTTACCAGCACCGTTAGGTCCCAGC 14939 Query 225161 ACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAA-GAT--CTCAGGG 225217 ||| | || ||| |||| || | | | | |||| ||| || || ||| Sbjct 14938 ACGGCGATACGGCTCGACAGAGCGCACGTCACGGAGATGTTGTTGATCGACGGCTTGGGG 14879 Query 225218 ----CCAGTT--TGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 || | | ||||| | | || | ||| | |||||| ||||| Sbjct 14878 GTACCCGGGTACTGGTACGAACAGTTCGTCAGACGAA------TGATGGGCTTACCCTTG 14825 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTT---GGTCACCGCGTCC 225328 | || | | ||||| |||||||| |||||| |||| | || ||| ||| Sbjct 14824 TTCTTGATGTCAGCAAGGAAACCGGGCTCCGGGAACGTGAACTTCACGTTCTCCGACTCC 14765 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCG 225388 || |||||||| | |||||| || || ||||||| |||| ||| || Sbjct 14764 ---AGCTCGTAGTAGGCCTTAGCCTCAGGCTTCTGCTCCACGAACTTGGACAAGTTGCCC 14708 Query 225389 AGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCA 225448 || || ||||||| || ||| |||| || | || || ||| || | |||| Sbjct 14707 TTGTAGATCTTGAGCTTACGGGTCT---CGTAGTGGATGATGTTCGTGCAGACCGTGTCA 14651 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508 ||||| || |||||||| ||||| |||||||| | |||||| ||||| | | | | || Sbjct 14650 AGGAAACCGGAGTCGTGCGACACCATGATGGAGGTCACGTTGGTCAGACTCGTCAAGTAG 14591 Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568 | ||||| || ||||| |||| |||| |||||| || || || || || |||||| Sbjct 14590 TTCTCCAGCCAGGCGACGTTCTTGACATCCAAGTGGTTCGTCGGCTCATCAAGCAGCAGG 14531 Query 225569 ATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGAC 225628 ||||| || | || ||||| || | || || ||||| ||||| || ||||| Sbjct 14530 ATGTCGGCCTTCTGAAGCATGGCACGGGCCAGCTCGAGTTTCATCTTCCAACCACCGGAA 14471 Query 225629 AGGGAGCC 225636 |||| ||| Sbjct 14470 AGGGTGCC 14463 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||||| ||| | | ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 15662 GTGAGTAATCATGAGCACACCACCGTTGAACTCCTTGATGGCCGAAGCAAGGGCACCAAG 15603 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 || |||||||||||| ||||||| |||||||| || | | | ||| ||| | |||| Sbjct 15602 TGAGTCGCGGTCAAGGTAGTTCGTGGGCTCATCAAGCACCAGGATGTGCGGGTTCAGCCA 15543 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || || ||| | | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 15542 CATAGCAGCAGCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 15483 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 15482 GTGGGTACCGAACTCGG 15466 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 225778 GTCGTGGTCCACGTACACCGTCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGC 225836 || ||| || ||| |||| ||| ||||| | | | | |||||||||||| ||||||| Sbjct 14324 GTTGTGCTCGACGAACACAGTCTTGAGCTCGTCACGGCT-GGGGAAGCCCTCAAGCTGGC 14266 Query 225837 CATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGT 225896 | || | || || || | || || ||| || |||||||||||| || |||| Sbjct 14265 CGTTGGAGATGGCGCGCATGAGCGTCGACTTACCACAACCGTTGGGACCGCACAGACCGT 14206 Query 225897 AATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGG 225956 || | | || ||||||| | || || | | |||||| | ||| | ||||| |||| Sbjct 14205 AACGGTGTCCACGCTTGAGGCGAAGACGAGCGTTGTTCAGCAAAATCATACCACCGTAGG 14146 Query 225957 CAAGGGAGAACTCGCAATCGCACAGGTC 225984 |||| ||||||||||| | ||||||||| Sbjct 14145 CAAGCGAGAACTCGCAGTTGCACAGGTC 14118 >seq563 Length=18407 Score = 161 bits (178), Expect = 2e-34 Identities = 375/552 (68%), Gaps = 10/552 (2%) Strand=Plus/Plus Query 268247 TGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCG 268306 |||||||| |||||| |||||||||||| || ||||| ||||| |||||||| || Sbjct 13771 TGGAGCATGCGCCACATGCATTCGACATAGTCGCGAGCATGCCCCCAGTCGCGCTTGGCA 13830 Query 268307 TCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACG-CGTGCAAGACCGCG 268365 || | ||| || | || ||||| |||| |||| ||| | | || | | | | || Sbjct 13831 TCTAGGTTGCCAACAAAGAGGCACTTCTCGATGCC-AGCATGAATACGAACCACAGCACG 13889 Query 268366 AGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGAT 268425 ||||| || || || ||||| || || ||| | ||||| ||||||||||| || || Sbjct 13890 TGTGATCTTGCGAGTGACGAAGGTACGCCCTCGTCGCGGGCTTTCGTGGTTGAACAGAAT 13949 Query 268426 GCCGTTGCAC-GCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 ||||| ||| |||||||| | || || ||||||| |||||| || |||| | || | Sbjct 13950 TCCGTT-CACAGCGAACATATCGTAAGCTTCACGGTGGTTCACCACACTCCAAAAGGCGA 14008 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGG 268543 | ||| || || | || || ||||| || ||||| || || || || | || || Sbjct 14009 ATTGCTTGGCTACACCATAGGGTGAACGCGGGTGGAATGGAGT-GTCCTCGTCCTGTGGA 14067 Query 268544 ATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTT 268603 || || || ||||| | | || || || ||||||||||| || || | Sbjct 14068 ATGGCTTTCACCTTGCCGTACAATTCACTCGTTGACGCTTGGTAGAATCGCGTCGTGTGC 14127 Query 268604 TCGAGACCGCAGATTCGGATTGCCT-CGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 || || || || | || | || | | || || || || |||| |||| ||||| Sbjct 14128 TCAAGTCCACACGTGCGTA-AGCATGTCAACAGGCGGAGTGTCCCCAGAGCATCGACGTC 14186 Query 268663 CGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATA 268722 || || || || | | ||||| || |||| |||||| | || |||||||| || Sbjct 14187 TGCAGTGTATTCGGCGAGTTCGAACGAGACCTTAACATGGGACATTGCTCCCAGGTTGTA 14246 Query 268723 AACCTCATCCGGTTTGACCTGCTGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAGGT 268781 || ||||| ||| || || ||||||| ||| | ||| | | ||| ||||||| Sbjct 14247 CACTTCATCGGGTCGCACACGCGCGACGATCTGGCAC-AAGTTGGACGCGTCCGTGAGGT 14305 Query 268782 CTCCGTAGTGCA 268793 |||||||||||| Sbjct 14306 CTCCGTAGTGCA 14317 >seq1010 Length=11520 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || ||||| ||||| || |||| |||| ||| ||||| ||||| || |||||||| || Sbjct 289 TAGTTTCCACCGCGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAG 230 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 ||| || || | || || || | |||||| |||||||| || || | || ||||| Sbjct 229 TCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCA 170 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || ||||||||||||||||| |||||||| ||||||| ||||| | ||| | | Sbjct 169 GGGGGAATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGC 110 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 109 TCCACGTCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 57 >seq414 Length=22499 Score = 150 bits (166), Expect = 3e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 1 CCACCGCGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 60 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 61 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 120 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| ||||||| ||||| | ||| | | || || Sbjct 121 ATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 180 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 |||| ||||| || || || || || ||||| ||||| |||||||| |||| Sbjct 181 TCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATCTTGCT 233 >seq911 Length=12855 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 12050 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 11991 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 11990 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 11931 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| ||||| || ||||||| ||||| | ||| | | || || Sbjct 11930 ATGCCTTCCTTGTCCTGAATTTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 11871 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || || || || ||||||||||| |||||||| Sbjct 11870 TCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATCTGCAT 11824 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 12278 CCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 12219 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 12218 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 12159 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| ||||| || ||||||| ||||| | ||| | | || || Sbjct 12158 ATGCCTTCCTTGTCCTGAATTTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 12099 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || || || || ||||||||||| |||||||| Sbjct 12098 TCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 12052 Score = 143 bits (158), Expect = 5e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| ||||| ||||| || || | |||| ||| | || ||||| || |||||||| || Sbjct 12513 TTAGTTTCCGCCGCGCAGACGAAGCACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTA 12454 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||| || || | || || || | |||||| |||||||| || || | || ||||| Sbjct 12453 GTCGCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 12394 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || ||||||||||||||||| ||||| || ||||||| ||||| | ||| | | Sbjct 12393 AGGGGGAATGCCTTCCTTGTCCTGAATTTTCTGCTTGACGTTGTCGATCGAGTCCGACGG 12334 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||| || || || || || ||||||||||| |||||||| Sbjct 12333 CTCCACGTCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAGATCTGCAT 12280 >seq688 Length=17951 Score = 120 bits (132), Expect = 6e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || || || || | || || || | |||||| |||||||| || Sbjct 3732 TTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 3673 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || |||||||||||||| || || || ||||||| || Sbjct 3672 AGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATTTTCTGCTTGACGTTGTCA 3613 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 ||| |||| | | || || |||| |||||||| || ||||| |||||||| || || Sbjct 3612 ATGCTGTCGGACGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAG 3553 Query 68454 ATCTGCATTAT 68464 |||||||| || Sbjct 3552 ATCTGCATGAT 3542 >seq1812 Length=5076 Score = 89.7 bits (98), Expect = 9e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 224501 GCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGG 224560 ||||| |||| | |||| || ||| ||||||||||||||||||| | | | ||| || Sbjct 3610 GCGCCCAGCGCCGCGCGATCCAGGTAGTTCGTCGGCTCATCCAGCACCAGCAAGTGCGGA 3551 Query 224561 CACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGG 224620 | | ||||| || ||| | | ||||| |||||||||||| ||||| || || || ||| Sbjct 3550 CGGTTCCACATAGCAGCAGCGATCACCAACTTCACCTTCTGGCCGCCCGACAGACCACGG 3491 Query 224621 AT 224622 || Sbjct 3490 AT 3489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921579901687080