Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq706 98.7 4e-15 >seq706 Length=15625 Score = 98.7 bits (108), Expect = 4e-15 Identities = 195/286 (68%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | || || || || ||||||||||| | || || ||||| || || |||| Sbjct 13638 ATGCGGTGGTGACGGTGCCGGCGTATTTCAATGACTCGCAGCGCCAAGCGACCAAGGATG 13697 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| ||||||||||| || || || || || ||||| || || || || |||||| Sbjct 13698 CCGGAGTCATTGCTGGTTTGAACGTGCTGCGTATCATTAACGAGCCGACCGCTGCTGCTA 13757 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || || || || ||| ||||| || || || | || | || | || ||| Sbjct 13758 TTGCCTACGG-CTTGGA----CAAAA-AAGGAGGCGAGCACAACGTGTTGATCTTCGATC 13811 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | || || ||||| |||| || | ||| | || || || || | || || || | Sbjct 13812 TAGGCGGCGGAACGTTTGATGTATCGCTGCTTACGATCGAGGAAGGAATCTTCGAGGTGA 13871 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||| || ||||||||| || | ||||||||||| |||| || Sbjct 13872 AGGCTACTGCTGGTGATACGCACTTGGGAGGTGAAGACTTTGACAA 13917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975625017052412