Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20agathidicida_20[genbank_20GCA_5F001314445.1_202015- 10-14] 3,689 sequences; 37,238,500 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq911 105 5e-18 >seq911 Length=12855 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23605 CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664 || || |||||||||||||| || || || || || || |||||||| || || || || Sbjct 11818 CTCAAGATGCAGATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTGGACGTGGAG 11877 Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 | ||||| | | || | | || || |||||| ||||| ||||| | || || Sbjct 11878 CCGTCGGACTCGATCGACAACGTCAAGCAGAAAATTCAGGACAAGGAAGGCATTCCCCCT 11937 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 || || ||||| | || || |||||||| || ||||| |||| ||||| | |||| Sbjct 11938 GACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGAC 11997 Query 23785 TACAACATACAAAAAGAGTCCAC 23807 |||||||| || || ||||| || Sbjct 11998 TACAACATCCAGAAGGAGTCGAC 12020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337994403194012