Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq10576 322 4e-83 seq6779 176 4e-39 seq5234 165 7e-36 seq7195 149 6e-31 seq5421 140 3e-28 seq7887 138 1e-27 seq9710 120 3e-22 >seq10576 Length=3682 Score = 322 bits (356), Expect = 4e-83 Identities = 994/1526 (65%), Gaps = 31/1526 (2%) Strand=Plus/Plus Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||||||||| || || ||||| | ||| |||||||| ||| | || |||| || || Sbjct 825 AAACTCGCCGGCCAGCACACGGCGGTTGTACATGTTGGACGTGTAAGGCTCGATGGACTC 884 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 |||||| ||||| |||||||| || || || ||||||||||| || | ||| || ||||| Sbjct 885 ATTGTTGCCCAGGATCTGAGCTGTGGACGCCGTCGGCATCGGTGCAACCAGCAGTGAGTT 944 Query 22585 TCTCAAGCCGTGCTTTGA-AATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA-- 22641 | | |||| ||||| | | | |||||| || ||||| ||| || | || Sbjct 945 GCGAAGACCGT-ATTTGATTACGTCATCCTTGAGTGCCGCCCAGTTCCAGAGTCCAGATG 1003 Query 22642 -CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTT 22700 || || || | ||||||| ||| | || || ||||| ||| || ||| ||| | Sbjct 1004 CAGGTGTGAC---GCCCCACATGTCGAACTGGAAGACGCCCTTACTGGCAGGGGAGCCCT 1060 Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760 | |||| ||||||||||| || | ||| | || | || ||||| ||| ||| Sbjct 1061 GGAACGTCTCGTACGGACCCAATTCCTTGGCGATCTCCATGGACGTCTCCATTGCGGCGT 1120 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCA 22820 | || || ||||||||||| |||||||| | || || ||| ||| || ||| Sbjct 1121 AGTAGATCGTCTCGAAGATGTTCTTGTTGAGCTCACTAGCTTGCTTGCTCTCGAAC-GCA 1179 Query 22821 TA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 || ||| | | |||||| || |||| |||||| ||||| ||||| || || || | Sbjct 1180 TAGTTCATGAGGATGAACGCATCAGCCAGACCCTGGACGCCAATACCAATGGGGCGATGA 1239 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 || || ||| ||||| | | |||||| | || || || |||| Sbjct 1240 CGCATGTTGGACTTCCGAGCCTCTGCTACAGGATAGTAGTTGACGTCAATGACCTTGTTG 1299 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 | ||| | || | | || | | ||||| | |||||| | Sbjct 1300 AGGTTGCGAGTGATCACCTTGACCACTTCATACAGTTTCTGGTAGTCGAACACGCCC--T 1357 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 || | || |||||| | || | || || | ||||| || |||||||| || Sbjct 1358 CGT-CCACGAACTTGGGCAGCGCCACAGACGCCAAGTTGCACACTGCCACCTCATCGGGC 1416 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 ||||||||||| | | ||| |||| ||||| | |||||||||| || | Sbjct 1417 GACGTGTACTCCATCACCTCGCAGCATAAGTTGCTGGAGCGGATCGTGCCCAGGTTCTGC 1476 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 ||||| || || ||| | |||||||||||||| | ||| |||||||||| | Sbjct 1477 TGGTTCGACTTGCGGTTGGCTGCGTCCTTGTAGAGCATAAAGGGCACTCCCGTCTCGATC 1536 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCC 23238 |||| || | ||| || ||||| ||| |||| || ||| || | | || Sbjct 1537 TGCGCGTCCAGGATGGCGAACCACAGCTGCTGGGCGTTAA-TGGTCTTCCGAGCGCGTCC 1595 Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 ||| | ||||||||||| |||| ||| ||||| ||| | || | || ||| || || Sbjct 1596 TTCCTTCTCGTACTTTTCATACAGCGCTTCAAACTCGTCTCCCCAGCACTCGTAGAGACC 1655 Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTCTCAT 23355 || | || | ||||| | ||||||||| | |||| || || | |||| Sbjct 1656 AGGAGCTTCGTTAGGACAGAATAGACTCCACTT---ACCATTGGCCTCCACTCTCTTCAT 1712 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 || ||||| || | ||| || |||||||||| || || ||||| | ||| ||||| Sbjct 1713 GAAGAGATCAGGCACCCAGAGCGCGTAGAACAAGTCACGAGCGCGGTGCAGCTCGTTGCC 1772 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | |||||| || ||||| || || |||||||| || ||||| ||||| | || | Sbjct 1773 GTGGTTCTTGCGCAGATCCAGGAACTCGAACACGTCTGCGTGCCATGGCTCCAAATAGAT 1832 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 ||||| | || | |||| |||||||| || || || || ||||||| ||| | Sbjct 1833 AGCAAAGGATCCTTTGCGCTTACCTCCGCCCTGGTCCACATAGCGAGCCGTGTCGTTAAA 1892 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACC 23595 ||| | ||||| || | | || ||||| | ||| | | ||| | | | | Sbjct 1893 CACACGCAGCATGGGGATAATGCCATTGGAGGAGCC----ATTCGTGCCGCGGATGTAGC 1948 Query 23596 TTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || ||||| | |||||| | || || || ||||| || | || ||||| Sbjct 1949 TGTTGGTGGCTCGGATGTTGTGCATACTGATGCCAATACCTCCCGCCCACTTGGATATGC 2008 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 ||||||||| || || |||||||||||||||||||| ||| || | | || | | Sbjct 2009 ACGCGCATTGCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCATCCTGCATTGCCAATA 2068 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 |||||| ||||||| || | ||||| |||| ||| || || ||| | |||| Sbjct 2069 GGAAACAAGAAGACAGCTGAGGACGTGGCGTGCCGGCGTTGAAGAGAGTAGGGGTCGCGT 2128 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC-CTCT 23830 |||| ||| | | |||||| || | |||||| |||| ||||| | ||||| |||| Sbjct 2129 GCGTGAAGAACTTTTGCGACATGAGCTCGTACGTCTCGAGCGCGGCCTGGATGTCGCTCT 2188 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCG 23890 ||| || || | || ||||||| ||||| | || || | ||| ||| ||| Sbjct 2189 -TGTGGATGCCCAGCGCCACGCGCAGAATCATCTGCTGCGGCCGCTCCACCACTTTGCCA 2247 Query 23891 TTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAG 23950 || | ||| || || || | | ||| || || ||||| ||||| || | ||| Sbjct 2248 TTCACGCGGAAGAGGTAGCCTCGCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCGAAG 2307 Query 23951 TCACGATCGTGCACTATGGCCGAATT 23976 || || ||||| | |||||||| || Sbjct 2308 TCGCGGTCGTGGATGATGGCCGAGTT 2333 >seq6779 Length=4860 Score = 176 bits (194), Expect = 4e-39 Identities = 550/838 (66%), Gaps = 22/838 (3%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||| | |||||||| ||||| || || || || ||||| | ||| || | || Sbjct 1221 GACGTGTGGCAGATGTACAAGAAGGCGGAGGCCTCCTTCTGGACGGCCGAGGAGCTGGAY 1162 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||| | ||||| | ||| |||| |||| ||| ||| | | || || || Sbjct 1161 CTGGTGCACGATCTCAACGACTGGGCAAAACTCACAGACAACGAGCGTCACTTCATCAAG 1102 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||| ||||||| ||||| || || ||||| || |||||||| ||| | | || Sbjct 1101 TACGTTCTGGCGTTCTTCGCTGCTAGTGACGGTATCGTCAACGAGAACCTGGCC--ATGA 1044 Query 57747 TTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 |||| | |||||||| | |||| || | ||||| ||||| || || | || | Sbjct 1043 ACTTCAGTAATGAAGTGCAGATACCGGAAGCTCGCTGCTTCTACGGCTTCCAGATCGCTA 984 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || || | || || || |||||||||| || || || || ||| | |||||| || Sbjct 983 TCGAGAATATCCACTCGGAGGTGTATTCGCTGCTTATTGACACATACATCAAGGACGCCG 924 Query 57865 ACGAGAAACGTAGACTGTTCAACGCG--ATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 |||||| | ||| | | ||| | ||||| || || || || |||||||| Sbjct 923 TGGAGAAA-GACCACT-TGCTACGTGCTATCGAGACTATCCCATGTGTCCAGAAGAAGGC 866 Query 57923 AGAGTGGTCAATCAAATGGA-TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCG 57981 | ||| | | |||||| | | ||| | | ||| ||| ||| | || | | Sbjct 865 CAACTGGGCGCTAAAATGGTGTGACCCGCGTGT-GTCGTCGTACGCAGAGCGTCTGCTAG 807 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 ||||||| || || |||||||| ||||||||||| ||| | | || ||| | | Sbjct 806 CGTTCGCTGCAGTGGAAGGTATCTTCTTTTCGGGGTCATTTTGTTCCGTTTTCTGGCTTA 747 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| ||||| || ||||| || |||| || |||||| |||| || || |||| Sbjct 746 AGAAGCGCGGTCTTATGCCTGGTCTGAGCTTCTCAAACGAGATGATCAGTCGTGATGAGG 687 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGT---CAATAAACCGACGC 58158 | | || || ||||| |||||| |||||||||| | | || ||| | |||| | Sbjct 686 GCATGCACACGGATTTCGCGTGCTTAATGTACTCGAAGCTAGTTAACAAGATACCGGAGA 627 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 | || || || || || ||| || || | ||| || | ||||| || || Sbjct 626 G---CCGTGTCCACGAGATCATTCGCGATGCTGTGGTGATTGAGCACGAGTTCGTGTGCG 570 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | | || || |||| | ||||||||||| | | |||| | |||||||||| Sbjct 569 ACTCGCTGCCTGTGGAGCTTATCGGTATGAACTCAGCGCTCATGTGTCAATACATTGAGT 510 Query 58279 TTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCAT-TACAACACGAAAA 58335 |||| || || | || | | ||| ||||| | | | | || |||||| ||| | Sbjct 509 TTGTGGCGGATCGTCTACTATACTC--ACTGAGT-GTGTCCAAGATCTACAACGTGAAGA 453 Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | ||||| || | ||| | ||||||| || |||||||||||||||| ||||| || Sbjct 452 ACCCGTTCGACTGGATGGACATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAA 395 >seq5234 Length=8456 Score = 165 bits (182), Expect = 7e-36 Identities = 547/836 (65%), Gaps = 30/836 (4%) Strand=Plus/Plus Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632 ||| | |||||||| ||||| || || || || ||||| | || || | |||||| Sbjct 4957 TGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATCGACCTGGTG 5016 Query 57633 AAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692 | || || | |||||| || | || ||| | | || || || |||||| Sbjct 5017 CACGACCTCAAGGATTGGACCAAGCTTACGGACAACGAGCGCCACTTCATCAAGCACGTG 5076 Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752 | || || ||||| || ||| || || || |||||||| |||| | | || |||| Sbjct 5077 CTCGCCTTCTTCGCAGCCAGCGACGGAATCGTGAACGAGAACTTGGCC--ATGAACTTCA 5134 Query 57753 CAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAA 57810 | |||||||| ||| | ||||| ||||||| |||||||| || | ||||| || | Sbjct 5135 GTAATGAAGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGATTCCAGATCGCCATCGAGA 5194 Query 57811 ACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA-CGAG 57869 || | || || || | || || || ||||| || |||||| | ||||| ||| |||| Sbjct 5195 ACATCCACTCGGAGGTCTACTCACTGCTCATTGACACGTACATCAAGGATG-CGATCGAG 5253 Query 57870 AAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTG 57928 || | ||||| ||||| || || || || ||| || | ||||| ||| | || Sbjct 5254 AAGGATCATCTGTTGCGTGCGATTGAGACCATTCCGTGCG-TCACGAAGAAAGCACACTG 5312 Query 57929 GTCAATCAAATGGATAAAAAGCGCCAC------GGCCACGTTCGCCGAGAGGCTAATCGC 57982 | | |||| ||| ||| | | | || | | | | ||| | ||| | || Sbjct 5313 GGCGCTCAAGTGGT------GCGACCCTCGTGTGTCCTCCTACCCGGAGCGTCTACTGGC 5366 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGA 58041 || || ||||| || || || ||||| ||||| ||| ||| || | || ||| | | Sbjct 5367 TTTTGCTGCCGTTGAGGGCATCTTCTTCTCGGGTTCCTTCTGCTCCA-TCTTCTGGCTTA 5425 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || ||||| ||||| || || | || |||||| | || || ||||||| Sbjct 5426 AGAAGCGTGGCCTCATGCCTGGACTCAGCTTCTCGAACGAGCTCATCAGTCGTGACGAGG 5485 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161 || | || || || || || ||||| ||||||| | | |||| ||| | | || | Sbjct 5486 GTATGCACACGGACTTCGCCTGCCTCCTGTACTCCAAGCTGGTCACTAAGCTGCCGGAGA 5545 Query 58162 ATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAG 58221 ||| | || || || || ||||| | ||| || | ||||| || || Sbjct 5546 GCCGCGTGCACGAGATCATTCGTGACGCGGTGGTGATTGAGCACGAGTTCGTGCGTGACT 5605 Query 58222 CCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTG 58281 | || ||||||| || | || |||||| | | |||| ||||||||||||| | Sbjct 5606 CGCTGCCGGTGGAGCTGATTGGCATGAACTCGGGCCTCATGTGCCAGTACATTGAGTTCG 5665 Query 58282 TTGCCGACAGACTTTTGCTCGAACT-GATTGGAGAG--CGTCAT-TACAACACGAAAAAT 58337 |||| ||| | | |||| | ||| | |||| | | | || ||| || | || || Sbjct 5666 TTGCTGAC---CGTCTGCT-GTACTCGCTTGGTGTGTCCAAGATCTACCACGCCAAGAAC 5721 Query 58338 CCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || | ||| | ||||||| ||| |||||||||| ||||| ||||| || Sbjct 5722 CCTTTCGACTGGATGGACATGATCTCTCTCCAGGGCAAGACCAACTTCTTCGAGAA 5777 >seq7195 Length=47515 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| |||||| |||| ||||| ||||| ||| | ||||| || || Sbjct 44354 AAGATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATTACCCTGGACGTGGAGCCT 44413 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || || | || ||||||||||||| | ||||| ||| Sbjct 44414 TCGGACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCGCCTGAC 44473 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || |||||||| || ||| |||| ||| | || ||||||| || Sbjct 44474 CAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTAC 44533 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || |||||||| ||||| || Sbjct 44534 AACATCCAGAAGGAGTCTACTCTTCACCTGGTTCT 44568 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| ||||| ||| | ||||| || || || Sbjct 44584 CATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACGATTACCCTGGACGTGGAGCCTTC 44643 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || || | || ||||||||||||| | ||||| ||||| Sbjct 44644 GGACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCA 44703 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| |||| ||| | || ||||||| || || Sbjct 44704 GCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 44763 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || |||||||| ||||| || | ||| | ||||| Sbjct 44764 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGCGG 44811 >seq5421 Length=2020 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || ||||| |||||||| ||||||| || ||| Sbjct 684 AAGATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACGATCACGCTCGACGTGGAGCCG 743 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || |||| || ||||||||||||| | ||||| ||| Sbjct 744 TCGGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGAC 803 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||||||||| ||| | || || || |||| ||||| Sbjct 804 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACACTGAGTGATTAC 863 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || || |||||||| Sbjct 864 AACATCCAGAAGGAGTCTACGCTGCACCTGGTACT 898 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| |||||||| ||||||| || ||||| Sbjct 914 CATGCAGATCTTCGTGAAGACGCTAACGGGCAAGACGATCACGCTCGACGTGGAGCCGTC 973 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| || ||||||||||||| | ||||| ||||| Sbjct 974 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCA 1033 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | || || || ||||||| || || Sbjct 1034 GCAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAA 1093 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 1094 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCT 1126 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| |||||||| ||||||| || ||||| Sbjct 1142 CATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTC 1201 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| || ||||||||||||| | ||||| ||||| Sbjct 1202 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCA 1261 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | || || || ||||||| || || Sbjct 1262 GCAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGCGACTACAA 1321 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 1322 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCT 1354 >seq7887 Length=10481 Score = 138 bits (152), Expect = 1e-27 Identities = 176/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || ||||| || ||||| ||||||| || ||| Sbjct 996 AAAATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACGCTCGACGTGGAGCCG 1055 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||||| | || | ||||| |||| ||| ||||||||| ||| | ||||| ||| Sbjct 1056 TCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGAC 1115 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| | || ||| ||| || || || Sbjct 1116 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCGGACTAC 1175 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 ||||| || || || ||||| || || || || || | ||| | || ||| ||||| Sbjct 1176 AACATCCAGAAGGAGTCGACCCTGCACCTTGTGCTGCGTCTGCGTGGTGGTGGCAAGAAG 1235 Query 31426 CG 31427 || Sbjct 1236 CG 1237 >seq9710 Length=10376 Score = 120 bits (132), Expect = 3e-22 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| |||| ||||| || ||||| | ||||| || || Sbjct 1057 AATCATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACGCTGGACGTGGAGCC 998 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||||| | || | ||||| |||| ||| ||||||||| || | ||||| || Sbjct 997 GTCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGARGGAATCCCGCCTGA 938 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||||||| || ||||| ||||| ||| | || ||| Sbjct 937 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGAC 898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445679659430640