Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7195 100 2e-16 >seq7195 Length=47515 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | || || | || |||||| | || Sbjct 44357 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATTACCCTGGACGTGGAGCCTTCG 44416 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| | ||||| |||||||||| ||| ||||| ||||| || || |||||||| Sbjct 44417 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 44476 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || || | |||||| || |||| ||||| Sbjct 44477 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAAC 44536 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 44537 ATCCAGAAGGAGTCTACTCTTCA 44559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433245787793105