Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5234 369 7e-97 seq10576 291 2e-73 seq6779 241 2e-58 seq5172 116 7e-21 >seq5234 Length=8456 Score = 369 bits (408), Expect = 7e-97 Identities = 594/842 (71%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || |||| |||||| || |||||||| ||||||| | ||| Sbjct 4963 ATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATCGACCTGGTGCACGAC 5022 Query 42369 ACGGCCGGCTGGGAGTCA-CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGC 42427 | || | ||| | || | || ||||| ||| |||| || | || || Sbjct 5023 -CTCAAGGATTGGACCAAGCTTACGGACAACGAGCGCCACTTCATCAAGCACGTGCTCGC 5081 Query 42428 CTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGA 42487 ||||||||| ||| ||||| || || || |||||| |||||| | |||| || || Sbjct 5082 CTTCTTCGCAGCCAGCGACGGAATCGTGAACGAGAACTTGGCCATGAACTTCAGTAATGA 5141 Query 42488 GGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCA 42547 |||||| |||||| || ||||||||||| |||||||| ||||| |||||| | || Sbjct 5142 AGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGATTCCAGATCGCCATCGAGAACATCCA 5201 Query 42548 CTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||| ||||| ||| | |||||||| ||||||||||| |||| | ||||| | Sbjct 5202 CTCGGAGGTCTACTC---ACTGCTCATTGACACGTACATCAAGGATGCGATCGAGAAGGA 5258 Query 42605 CGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 ||||| || || ||||| || || ||| ||| |||||| || |||||||||| Sbjct 5259 TCATCTGTTGCGTGCGATTGAGACCATTCCGTGCGTCACGAAGAAAGCACACTGGGCGCT 5318 Query 42665 CAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724 ||| ||| ||| || | | | | | ||| | || | || ||| | ||||| Sbjct 5319 CAAGTGGTGCGACCCTCGTGTGTCCTCCTACCCGGAGCGTCTACTGGCTTTTGCTGCCGT 5378 Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGT 42783 |||||||||||||||||||| ||||| ||||||||||||||| ||| || || | Sbjct 5379 TGAGGGCATCTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTTAAGAAGCGTGGCCT 5438 Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843 | ||||| ||||||| |||||||||||| |||||||| | |||||||| |||| | || Sbjct 5439 C-ATGCCTGGACTCAGCTTCTCGAACGAGCTCATCAGTCGTGACGAGGGTATGCACACGG 5497 Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCAC-AAGCCCTCGAAGGAGCGGGTC 42902 |||| ||||||||||||| ||| | | || | ||| |||| || || || || Sbjct 5498 ACTTCGCCTGCCTCCTGTACTC---CAAGCT-GGTCACTAAGCTGCCGGAGAGCCGCGTG 5553 Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC 42962 | | ||||| || || |||| ||| ||| | |||||| | | |||||||| Sbjct 5554 CACGAGATCATTCGTGACGCGGTGGTGATTGAGCACGAGTTCGTGCGTGACTCGCTGCCG 5613 Query 42963 GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC 43022 ||| ||| | ||||||||| | |||||||||| ||||||| ||| ||| || ||| Sbjct 5614 GTGGAGCTGATTGGCATGAACTCGGGCCTCATGTGCCAGTACATTGAGTTCGTTGCTGAC 5673 Query 43023 CATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCC--GTGCCCCTTCGACT 43080 | ||| |||| | | | ||| | | ||||| |||||| | ||| ||||||| Sbjct 5674 CGTCTGCTGTACTCGCTTGGTGTGTCCAAGATCTAC--CACGCCAAGAACCCTTTCGACT 5731 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 ||||| | ||||| | |||||||||||||||| ||||||||||| || | ||| | Sbjct 5732 GGATGGACATGATCTCTCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTGGGCGAGT 5791 Query 43141 AC 43142 || Sbjct 5792 AC 5793 >seq10576 Length=3682 Score = 291 bits (322), Expect = 2e-73 Identities = 1362/2130 (64%), Gaps = 102/2130 (5%) Strand=Plus/Plus Query 243775 CAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAG 243834 || |||||||||||||||||||||||| | |||||||| || |||||||| ||| || Sbjct 510 CATGTAGTACATGCCGGTCTTGAGTCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTGAG 569 Query 243835 CTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTG 243894 || | || || | || ||| || | || ||| || ||||| ||||| Sbjct 570 TTTGCTGAT----AG---TCGG--GTCAGCGATGTG---GATGTTCAGAGACTGACTCTG 617 Query 243895 GTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCAT 243953 | || | | | |||| || || || | || | | | ||||||| ||||| Sbjct 618 GCAGATGTAAG-CGCCACGGTCAGCCGACAGATCCAGCACGGCCTTCTGTTTGATCTCCC 676 Query 243954 ACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGC 244013 || | || ||||| || ||||| ||| || || | | | || |||||||| || | Sbjct 677 ACACAGTTTTGTACTTGTCCTTGACGTGGTCTGGAATGGCCTTGACCTTCTGCACAGATC 736 Query 244014 CCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGT-TCCACAGGCCCAAGCGCTCCA-- 244070 | || | | ||| | || | || | || |||| | |||| |||| | Sbjct 737 CACCGTCATTTAGAATCTGATTACGTAC-TTCTGGTGTCCAGATTCCCA---GCTCAATA 792 Query 244071 -GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGG 244129 || ||| | ||||| | |||| || | | |||||| || | |||||| ||||| | | Sbjct 793 AGCTCCTTCATCAGGTACTTGTTGACGATCGTAAACTCGCCGGCCAGCACACGGCGGTTG 852 Query 244130 TAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTC 244189 || | |||| || ||||||||| ||| |||||||||| ||||| || ||| | Sbjct 853 TACATGTTGGACGTGTAAGGCTCGATGGACTCATTGTTGCCCAGGATCTGAGCTGTGGAC 912 Query 244190 GCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGT 244249 || |||||||| || | |||||||| ||| | | |||| | || | || | Sbjct 913 GCCGTCGGCATCGGTGCAACCAGCAGTGAGTTGCGAAGACCGTA--TTTGATTACGTCAT 970 Query 244250 C--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGT 244307 | |||| | ||||| ||| | || ||| | | || ||| ||||||||||| Sbjct 971 CCTTGAGTGCCGCCCAGTTCCAGAGTCC--AGATG----CAGGTGTGACGCCCCACATGT 1024 Query 244308 CAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGC 244367 | ||||| | | ||||| ||| | ||| ||||| | | ||| ||| ||||| Sbjct 1025 CGAACTGGAAGACGCCCTTACTGGCAGGGGAGCCCTGGAACGTCTCGTACGGACCCAATT 1084 Query 244368 GCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCT 244427 || ||| | || | | || | |||||||||||||| ||||||||||| ||| Sbjct 1085 CCTTGGCGATCTCCATGGACGTCTCCATTGCGGCGTAGTAGATCGTCTCGAAGATGTTCT 1144 Query 244428 TGTTCATGTCGCGGGCCTTGCC-GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCG 244486 |||| | || | || |||| || ||| | | ||| | ||||| | || Sbjct 1145 TGTTGAGCTCACTAGC-TTGCTTGCTCTCGAACGCATAGTTCATGAGGATGAACGCATCA 1203 Query 244487 GCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCG 244546 ||||| ||||| ||||| || || ||||| | || ||| ||||||| | || || Sbjct 1204 GCCAGACCCTGGACGCCAATACCAATGGGGCGATGACGCATGTTGGACTTCCGAGCCTCT 1263 Query 244547 GGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACG 244606 | || || || ||||| |||| || ||||||||||||||||| ||||||| ||| Sbjct 1264 GCTACAGGATAGTAGTTGACGTCAATGACCTTGTTGAGGTTGCGAGTGATCACCTTGACC 1323 Query 244607 ACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACA 244666 || || ||| ||| ||||| || || ||||| | ||| Sbjct 1324 ACTTCATACAGTTTCTGGTAGTCGAACACGC------CCTCGTC------------CACG 1365 Query 244667 AACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTAC 244726 |||| | || || || |||| |||||| || |||||||| || | |||||| Sbjct 1366 AACTTGGGCAGCGCCACAGACGCCAAGTTGCACACTGCCACCTCATCGGGCGACGTGTAC 1425 Query 244727 TGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGAC 244786 | | | |||| ||| | ||| ||| | ||| |||||||||| ||| || || ||| Sbjct 1426 TCCATCACCTCGCAGCATAAGTTGCTGGAGCGGATCGTGCCCAGGTTCTGCTGGTTCGAC 1485 Query 244787 TTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACG 244846 ||| |||| ||||||||||||||||| |||||| | || ||||||| ||| ||| | Sbjct 1486 TTGCGGTTGGCTGCGTCCTTGTAGAGCATAAAGGGCACTCCCGTCTCGATCTGCGCGTCC 1545 Query 244847 AGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCG 244906 |||| | | ||| || | | || || | ||| | ||||| || || |||| Sbjct 1546 AGGATGGCGAACCACAGCTGCTGGGCGTTAATGGTCTTCCGAGCGCGTCCTTCCTTCTCG 1605 Query 244907 TAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGAC 244966 || ||||| || || |||||| |||||| ||||| || || || | | Sbjct 1606 TACTTTTCATACAGCGCTTCAAACTCGTCTCCCCAGCACTCGTAGAGACC-AGGAGCTTC 1664 Query 244967 G-CCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGG 245025 | || || | |||||||||| || | ||| || |||| ||||||||| || || Sbjct 1665 GTTAGGACAGAATAGACTCCACTTACCATTGGCCTCCACTCTCTTCATGAAGAGATCAGG 1724 Query 245026 GATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCT 245085 | |||||| || | ||| | ||| | | | ||| || ||| |||||| | Sbjct 1725 CACCCAGAGCGCGTAGAACAAGTCACGAGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCG 1784 Query 245086 CAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145 ||| |||| || || || ||||| ||||||| ||||||| |||| ||| | || || Sbjct 1785 CAGATCCAGGAACTCGAACACGTCTGCGTGCCATGGCTCCAAATAGATAGCAAAGGATCC 1844 Query 245146 GGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCA 245201 ||||| || |||||||||| | | ||||| |||| || | |||| Sbjct 1845 TTTGCGCTTACCTCCGCCCTGGTCCA----CATAGCGAGCCGTGTCGTTAAACACACGCA 1900 Query 245202 GGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC 245261 | | || | ||||| || ||| ||| || ||||| ||||||| | || | | Sbjct 1901 GCATGGGGATAATGCCATTGGAGGAGCCATTCGTGCCGCGGATGTAGCTGTTGGTGGCTC 1960 Query 245262 TGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCT 245321 || |||| || ||||| | || || || |||||| ||| ||||| || Sbjct 1961 GGATGTTGTGCATACTGATGCCAATACCTCCCGCCCACTTGGATATGCACGCGCATTGCT 2020 Query 245322 TGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGG 245381 ||| ||||| |||||||| || ||| || ||| | || || || || | Sbjct 2021 TGAGCGTGTCGTAGATGCCCTCGATCGAGTCATCCTGCATTGCCAATAGGAAACAAGAAG 2080 Query 245382 ACAGCTG-GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAG 245440 ||||||| || | ||| | ||| | |||||| ||||| ||| | ||||| || ||| | Sbjct 2081 ACAGCTGAGGACGTGGCG-TGCCGGCGTTGAAGAGAGTAGGGGTCGCGTGCGTGAAGAAC 2139 Query 245441 CGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGC 245500 ||| | || | ||||||||| |||| || | ||||| | |||||| | Sbjct 2140 TTTTGCGACATGAGCTCGTACGTCTCGAGCGCGGCCTGGATGTCGCTCTTGTGGATGCCC 2199 Query 245501 AGGGCGCAC-CTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTT--- 245556 || || ||| | || | | ||||| ||| ||| | || | || || Sbjct 2200 AGCGC-CACGCGCAGAATCATCTGCTGCGGCCGCTCCA------CCACTTTGCCATTCAC 2252 Query 245557 ---GAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGC 245613 || | |||| ||||||||||||||||| |||||||| ||| | |||||| Sbjct 2253 GCGGAAGAGGTAGCCTCGCTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCGAAGTCGCG 2312 Query 245614 GTGGTGCCTGACGGCTGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTAAAAC 245671 || ||| ||| ||| | || ||| ||| || ||| | | | ||| | |||||| | Sbjct 2313 GTCGTGGATGATGGCCGAGTTGAG-CTCGTCCTTGTGTTGCATCACT-ATCTCGTATACG 2370 Query 245672 TTTTGCGCTATGAGGGGAGC-CCTGAGCCCGGTGTCC-----GGATTGACGTTGAACCAG 245725 | | || ||||| || || ||| ||| || | | || | | || | || Sbjct 2371 TCATCAGCGATGAGCGGCGCAGCTG-CCCCTGTCTTCTCGTGGGTGTTATTGTGGAACA- 2428 Query 245726 AGCCTC----TTGCACACCTCCGAGAACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGAC 245781 |||| ||| ||| ||| ||| | | ||| ||| |||||||||| || Sbjct 2429 --CCTCGATGTTG-TCAC--TGAAGACCTT---GTTCGTGTTCTTGTGCAGGTTGGACAC 2480 Query 245782 TGCTATGCGCGCCGCCAACTTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGT 245841 || || |||||||||| |||| | |||| ||||| ||| || || | |||||| Sbjct 2481 GGCGATACGCGCCGCCAGCTTGGAGAAGTCCGGGTGCTGCGTGCTCTGGTACGCGGCCGT 2540 Query 245842 GTGGGCCAGCAGCTCGTCAATCTCGGACGT 245871 | ||| ||||||||| | ||||||||| Sbjct 2541 CTCGGCGGCCAGCTCGTCCAGCTCGGACGT 2570 >seq6779 Length=4860 Score = 241 bits (266), Expect = 2e-58 Identities = 564/842 (67%), Gaps = 21/842 (2%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||||||| || |||| |||||| ||||||||| | || |||| | || Sbjct 1209 ATGTACAAGAAGGCGGAGGCCTCCTTCTGGACGGCCGAGGAGCTGGAYCTGGTGCACGAT 1150 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGCC 42428 || ||||| ||| | || ||||| ||| |||| || | ||||| Sbjct 1149 CTCAACGACTGGGCAAAACTCACAGACAACGAGCGTCACTTCATCAAGTACGTTCTGGCG 1090 Query 42429 TTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAG 42488 |||||||| || |||||| || ||||| ||||||||||||| | |||| || || Sbjct 1089 TTCTTCGCTGCTAGTGACGGTATCGTCAACGAGAACCTGGCCATGAACTTCAGTAATGAA 1030 Query 42489 GTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCA 42547 |||||| ||| || || ||||||||||||||||||||||| || || ||||| | || Sbjct 1029 GTGCAGATACCG-GAAGCTCGCTGCTTCTACGGCTTCCAGATCGCTATCGAGAATATCCA 971 Query 42548 CTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||| |||||||| | ||||| | |||| |||||| ||| |||| ||| | Sbjct 970 CTCGGAGGTGTATTC---GCTGCTTATTGACACATACATCAAGGACGCCGTGGAGAAAGA 914 Query 42605 CGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCT 42664 | || | || || ||||| || || || || |||||||||| |||||||||| Sbjct 913 CCACTTGCTACGTGCTATCGAGACTATCCCATGTGTCCAGAAGAAGGCCAACTGGGCGCT 854 Query 42665 CAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724 || ||| || | | | ||| || ||| | ||| |||| || | || || Sbjct 853 AAAATGGTGTGACCCGCGTGTGTCGTCGTACGCAGAGCGTCTGCTAGCGTTCGCTGCAGT 794 Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGT 42783 || || |||||||| ||||| | || ||| | |||||||| ||| || ||| | Sbjct 793 GGAAGGTATCTTCTTTTCGGGGTCATTTTGTTCCGTTTTCTGGCTTAAGAAGCGCGGTCT 734 Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843 ||||| || || | |||||| ||||| | ||||| | || ||||| |||| | || Sbjct 733 -TATGCCTGGTCTGAGCTTCTCAAACGAGATGATCAGTCGTGATGAGGGCATGCACACGG 675 Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCC 42903 | || || ||| | ||| ||||| | || ||||| || || || |||| Sbjct 674 ATTTCGCGTGCTTAATGTACTCGA---AGCTAGTTAACAAGATACCGGAGAGCCGTGTCC 618 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 | ||||| || || |||| ||| ||| | |||||| | | |||||||| | Sbjct 617 ACGAGATCATTCGCGATGCTGTGGTGATTGAGCACGAGTTCGTGTGCGACTCGCTGCCTG 558 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 || || |||| |||||| | |||||||| | ||||| ||| || || || | Sbjct 557 TGGAGCTTATCGGTATGAACTCAGCGCTCATGTGTCAATACATTGAGTTTGTGGCGGATC 498 Query 43024 ATCTCCTGTGC---CAGA-TGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079 ||| || | | | || || ||| || |||||||| | | ||| |||||| Sbjct 497 GTCTACTATACTCACTGAGTGTGTCCAAG----ATCTACAACGTGAAGAACCCGTTCGAC 442 Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139 | ||||| | ||||| || |||||||||| ||||| ||||||||||| || | ||| Sbjct 441 TGGATGGACATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGTGTGGGCGAG 382 Query 43140 TA 43141 || Sbjct 381 TA 380 >seq5172 Length=6496 Score = 116 bits (128), Expect = 7e-21 Identities = 278/412 (67%), Gaps = 14/412 (3%) Strand=Plus/Plus Query 42736 TCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG-ATGCCCGGA 42794 ||||||||||| | ||| ||| | |||||||| ||| | | | ||| ||||| || Sbjct 2940 TCTTCTCGGGCTCGTTCTGCTCAGTTTTCTGGCTTAAGAA-ACGCGGTCTTATGCCTGGT 2998 Query 42795 CTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGC 42854 || | |||||| ||||| | ||||| | |||||||| |||| | ||| || || ||| Sbjct 2999 CTGAGCTTCTCAAACGAGATGATCAGTCGTGACGAGGGCATGCACACGGATTTCGCGTGC 3058 Query 42855 CTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATC 42914 | ||| |||| | || |||||| || || || |||| | ||||| Sbjct 3059 TTAATGTACTCGGA--AGCTGGTTAACAAGCTACCGGAGAGTCGTGTCCATGAGATCATT 3116 Query 42915 ACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC-AGTCGCTGCCCGTGTCCCTGGT 42973 || || |||| ||| ||| | |||||| | | || | |||||||| ||| || | Sbjct 3117 CGCGACGCTGTGGTGATTGAGCACGAGTTCGT-ATGCGACTCGCTGCCTGTGGAGCTTAT 3175 Query 42974 CGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTG 43033 ||| |||||| | |||||||| | ||||| ||| || || || | ||| || | Sbjct 3176 CGGTATGAACTCAGCGCTCATGTGTCAATACATTGAGTTTGTGGCGGATCGTCTACTATA 3235 Query 43034 C---CAGA-TGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGA 43089 | | || || ||| || |||||||| | | ||| ||||||| ||||| | Sbjct 3236 CTCACTGAGTGTGTCCAAGA----TCTACAACGTGAAGAACCCGTTCGACTGGATGGACA 3291 Query 43090 ACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 ||||| || |||||||||| ||||| ||||||||||| || | ||| || Sbjct 3292 TGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGTGTGGGCGAGTA 3343 Score = 95.1 bits (104), Expect = 2e-14 Identities = 268/408 (66%), Gaps = 19/408 (5%) Strand=Plus/Minus Query 42736 TCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG-ATGCCCGGA 42794 ||||||||||| | ||| ||| | |||||||| ||| | | | ||| ||||| || Sbjct 6217 TCTTCTCGGGCTCGTTCTGCTCAGTTTTCTGGCTTAAGAA-ACGCGGTCTTATGCCTGGT 6159 Query 42795 CTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGC 42854 || | |||||| ||||| |||||||| |||| | ||| || || ||| Sbjct 6158 CTGAGCTTCTCAAACGA-------------GACGAGGGCATGCACACGGATTTCGCGTGC 6112 Query 42855 CTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATC 42914 ||| |||| | || |||||| || || || |||| | ||| | Sbjct 6111 TCAATGTACTCGGA--AGCTGGTTAACAAGCTACCGGAGAGTCGTGTCCATGAGATCCTT 6054 Query 42915 ACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC-AGTCGCTGCCCGTGTCCCTGGT 42973 || || |||| ||| ||| | |||||| | | || | |||||||| ||| || | Sbjct 6053 CGCGACGCTGTGGTGATTGAGCACGAGTTCGT-ATGCGACTCGCTGCCTGTGGAGCTTAT 5995 Query 42974 CGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTG 43033 ||| |||||| | |||||||| ||||||| ||| || || |||| ||| || | Sbjct 5994 CGGTATGAACTCAGCGCTCATGTGTCAGTACATTGAGTTTGTGGCGGACCGTCTACTATA 5935 Query 43034 CCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACAT 43093 | ||||| | | |||||||| | | ||| ||||||| ||||| | || Sbjct 5934 CTCACTGGGTGTGTCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGACATGAT 5875 Query 43094 CTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 ||| || |||||||||| ||||| ||||||||||| || | ||| || Sbjct 5874 CTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGTGTGGGCGAGTA 5827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944155443395920