Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq10399 149 3e-31 >seq10399 Length=21380 Score = 149 bits (164), Expect = 3e-31 Identities = 398/597 (67%), Gaps = 20/597 (3%) Strand=Plus/Plus Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 || || |||||||||||||| || ||| || || ||| | ||| || || | | || Sbjct 7210 CGTGTGGTGGAGATCTACGGCCCCGAGAGCTCCGGCAAGACGACGCTG-GCTTTGA-GCT 7267 Query 66033 G--TGGCCAATGCCCAGAAGGCCG---GTGGCAACGCCGCCTACATCGACGCCGAACATT 66087 | | || | || |||||| ||| |||| | |||| ||||| || || || Sbjct 7268 GCATCGCTGAGGCTCAGAAGACCGAGGGTGGAGTCTGTGCCTTTATCGATGCAGAGCACG 7327 Query 66088 CTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGT-G 66146 || | ||| | | |||||| ||| || ||||||||| | ||| || || | | | Sbjct 7328 CTATTGACGCCCACTACGCCAAGGCTCTGGGGGTGGATATTGACGC-CTTGTATGTCTCG 7386 Query 66147 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 66206 ||||||||| | || ||| | || |||||||||| ||| ||| || ||||| | Sbjct 7387 CAGCCAGACTCCGGGGAGGAAGCTCTGGAGATCGCAGACACGCTCATCCGATCTGGAGCT 7446 Query 66207 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 66266 || | || | || ||||| |||||| || ||||||||||| |||||||||||||| Sbjct 7447 GTAGACCTCGTGGTGCTGGACAGTGTGGCAGCTCTGGTGCCGCGTGCGGAGCTCGAAGGT 7506 Query 66267 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 66326 || || || ||| ||| | | ||||| || || || ||| |||||| |||| ||| Sbjct 7507 GAAATGGGAGACCAGCAGATTGCTCTGCAGGCGCGACTTATGAGTCAGGCTCTGCGTAAG 7566 Query 66327 CTGACCGGCACGATTG-CCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGA 66385 ||||||| | |||| ||| ||||| || | | |||| ||| | ||| | Sbjct 7567 TTGACCGGGTC-ATTGTCCAAGTCCAACTGCACCATTATCTTCCTGAACCAGATCCGCCA 7625 Query 66386 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCG 66445 ||| | |||| | | || || | ||| || | ||||||| ||| | || Sbjct 7626 GAAAGTGGGCATCAT---CTTTGGATCACCCGAGGTGACGTCGGGTGGTACGGCGTTACG 7682 Query 66446 CTTCTACGCCTCGGTGCGTATGGATGTCCGC---AGGATCGCCACCGAGAAGGAAGGCGA 66502 || ||||| || ||||| ||||| ||||| | || |||| | |||||||| || Sbjct 7683 CTATTACGCGTCAGTGCGGTTGGATATCCGCCGTAAGACGGCCATC---AAGGAAGGTGA 7739 Query 66503 TGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 66559 | ||| ||| |||||| || || || || | |||||||||| |||| |||| Sbjct 7740 TCAGGTTGTTGGCAACGAGACTGTGGTCAAAGTGGCCAAGAACAAGTTGGCTTCTCC 7796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242424397833764