Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq11269 86.0 5e-12 >seq11269 Length=29615 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 108349 GGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCG 108408 ||| | ||||| || | || || | ||| | ||| | ||||||||||| ||| Sbjct 24600 GGTATCACGGCGGGTGCGCACCGCCTCTGGTCACACCGCGGCTACAAGGCCAAGCTGCCG 24541 Query 108409 TTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGG 108468 | | |||||||| ||| ||| |||| |||| || ||||||| ||||| Sbjct 24540 CTGCGTGTGTTCCTCATGCTGTGCAACTCGATGGCCTTCGAGGGCACCATCTTCGAGTGG 24481 Query 108469 GTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCC 108528 || || ||| | || ||||||||| ||| ||||||||||||||||| |||||| | Sbjct 24480 TCGCGTGACCACCGCGTGCACCACAAGGGCTCGGACACGACGGCCGACCCGCACAACTCG 24421 Query 108529 AACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATG 108570 | | || ||| ||||| ||| |||| ||| ||||| || Sbjct 24420 GAACGTGGACTCTTCTTCTCACACATGGGCTGGGTCATGGTG 24379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381700368990648