Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq8506 113 4e-19 >seq8506 Length=12877 Score = 113 bits (124), Expect = 4e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 550373 GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGAC 550432 |||||| |||| || | || | | | ||||| |||| || || || ||||| || ||| Sbjct 3681 GCTTTTATTGGCAAACACGTGAAGAACGCAGTGGTAACGGTCCCGGCCTATTTCAACGAC 3622 Query 550433 TCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATT 550492 || || || ||||| || |||||||||||| |||||||| || || || || |||||| Sbjct 3621 TCGCAGCGCCAAGCGACCAAAGATGCTGGAGCCATTGCTGGTCTGAACGTGCTGCGTATT 3562 Query 550493 ATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| || || || |||||||| |||| ||||| Sbjct 3561 ATCAACGAGCCCACGGCTGCTGCGATTGCCTATGG 3527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028472746832830