Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5421 91.5 1e-13 >seq5421 Length=2020 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || || || || || |||| ||||| || || || |||| |||||| Sbjct 684 AAGATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACGATCACGCTCGACGTGGAGCCG 743 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || | ||| | | || || ||||||||| ||||| |||||| | || || Sbjct 744 TCGGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGAC 803 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || |||| || || || ||||| ||||||| | | ||| || |||||| Sbjct 804 CAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACACTGAGTGATTAC 863 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || |||||| ||||| |||| | | ||||| || || Sbjct 864 AACATCCAGAAGGAGTCTACGCTGCACCTGGTACTGCGTCTGCGTGGTGG 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412763274530531