Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq10399 149 3e-31 >seq10399 Length=21380 Score = 149 bits (164), Expect = 3e-31 Identities = 398/597 (67%), Gaps = 20/597 (3%) Strand=Plus/Plus Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687 || || |||||||||||||| || ||| || || ||| | ||| || || | | || Sbjct 7210 CGTGTGGTGGAGATCTACGGCCCCGAGAGCTCCGGCAAGACGACGCTG-GCTTTGA-GCT 7267 Query 67688 G--TGGCCAATGCCCAGAAGGCCG---GTGGCAACGCCGCCTACATCGACGCCGAACATT 67742 | | || | || |||||| ||| |||| | |||| ||||| || || || Sbjct 7268 GCATCGCTGAGGCTCAGAAGACCGAGGGTGGAGTCTGTGCCTTTATCGATGCAGAGCACG 7327 Query 67743 CTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGT-G 67801 || | ||| | | |||||| ||| || ||||||||| | ||| || || | | | Sbjct 7328 CTATTGACGCCCACTACGCCAAGGCTCTGGGGGTGGATATTGACGC-CTTGTATGTCTCG 7386 Query 67802 CAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAG 67861 ||||||||| | || ||| | || |||||||||| ||| ||| || ||||| | Sbjct 7387 CAGCCAGACTCCGGGGAGGAAGCTCTGGAGATCGCAGACACGCTCATCCGATCTGGAGCT 7446 Query 67862 GTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGG 67921 || | || | || ||||| |||||| || ||||||||||| |||||||||||||| Sbjct 7447 GTAGACCTCGTGGTGCTGGACAGTGTGGCAGCTCTGGTGCCGCGTGCGGAGCTCGAAGGT 7506 Query 67922 GACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAG 67981 || || || ||| ||| | | ||||| || || || ||| |||||| |||| ||| Sbjct 7507 GAAATGGGAGACCAGCAGATTGCTCTGCAGGCGCGACTTATGAGTCAGGCTCTGCGTAAG 7566 Query 67982 CTGACCGGCACGATTG-CCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGA 68040 ||||||| | |||| ||| ||||| || | | |||| ||| | ||| | Sbjct 7567 TTGACCGGGTC-ATTGTCCAAGTCCAACTGCACCATTATCTTCCTGAACCAGATCCGCCA 7625 Query 68041 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCG 68100 ||| | |||| | | || || | ||| || | ||||||| ||| | || Sbjct 7626 GAAAGTGGGCATCAT---CTTTGGATCACCCGAGGTGACGTCGGGTGGTACGGCGTTACG 7682 Query 68101 CTTCTACGCCTCGGTGCGTATGGATGTCCGC---AGGATCGCCACCGAGAAGGAAGGCGA 68157 || ||||| || ||||| ||||| ||||| | || |||| | |||||||| || Sbjct 7683 CTATTACGCGTCAGTGCGGTTGGATATCCGCCGTAAGACGGCCATC---AAGGAAGGTGA 7739 Query 68158 TGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 68214 | ||| ||| |||||| || || || || | |||||||||| |||| |||| Sbjct 7740 TCAGGTTGTTGGCAACGAGACTGTGGTCAAAGTGGCCAAGAACAAGTTGGCTTCTCC 7796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247402653165936