Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8506 96.9 3e-14 >seq8506 Length=12877 Score = 96.9 bits (106), Expect = 3e-14 Identities = 212/317 (67%), Gaps = 3/317 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || || |||||||||||||| | || | || | || || | || Sbjct 3368 ACCAGACGGTTGTCGAAGTCTTCACCTCCCAAGTGCGTGTCACCCGCTGTCGCCTTGACC 3427 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||||| | | || | || || |||||| || || | ||| Sbjct 3428 TCGAAGATCCCTTCTTCAATGGTAAGCAGCGAGACGTCGAAGGTTCCGCCTCCAAGATCG 3487 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || ||||| || ||| | || || | ||||| |||| |||||| Sbjct 3488 AAGATCAGCACATTGTGCTCACCTCCTT---TCTTGTCCAACCCATAGGCAATCGCAGCA 3544 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || || || || || ||||| | || || || ||||||||||| ||| |||||||| Sbjct 3545 GCCGTGGGCTCGTTGATAATACGCAGCACGTTCAGACCAGCAATGGCTCCAGCATCTTTG 3604 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || ||||| | || || ||||| ||||| || || || || | || || | | || Sbjct 3605 GTCGCTTGGCGCTGCGAGTCGTTGAAATAGGCCGGGACCGTTACCACTGCGTTCTTCACG 3664 Query 282482 TCTTTTCCAATATAAGC 282498 | ||| |||||| |||| Sbjct 3665 TGTTTGCCAATAAAAGC 3681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739866126086142