Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq12351 96.9 3e-15 >seq12351 Length=7116 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/215 (71%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||| ||||| || |||| |||||||| || || || |||||| | | ||| Sbjct 5015 GCGTGGAACCCGGCTGATCTCAACGAGATGGCACTGCCACCTTGCCACATGTTCTGCCAG 5074 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | ||| | | | | || |||||| |||| ||||||||||| ||| | Sbjct 5075 TTCTACGTGG--CCGACGGGGAAT-TATCGTGCCAGATGTACCAGCGTTCGGCCGACATG 5131 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTCGC 142749 || ||||| || |||||||| || |||||||| || || | ||| ||| ||| Sbjct 5132 GGACTTGGCGTGCCATTCAACATCGCCAGCTACGCGCTGCTGACGCGGCTTGTTG--CGC 5189 Query 142750 GAATG--CGGTCTGGAACTCGGAGACTTCGTCCAC 142782 | || || ||| ||| || || ||| ||||| Sbjct 5190 AAGTGACTGGACTGAAACCTGGCGAGTTCATCCAC 5224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500401809111920