Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq12351 248 1e-60 >seq12351 Length=7116 Score = 248 bits (274), Expect = 1e-60 Identities = 460/661 (70%), Gaps = 13/661 (2%) Strand=Plus/Minus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || || ||||||||||| || || ||||||||||| || | ||| | || || || Sbjct 5268 AGTGGTTCCACGTGGTTTAGATACACGTGCGCGTCACCGATAACGTGGATGAACTCGCCA 5209 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 || || || || ||||| || || || | || ||||||| ||||||||| |||||| Sbjct 5208 GGTTTCAGTCCAGTCACTTGCGCAACAAGCCGCGTCAGCAGCGCGTAGCTGGCGATGTTG 5149 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099 || || || || || |||||||| |||| | |||||||| ||||||||| | |||||| Sbjct 5148 AATGGCACGCCAAGTCCCATGTCGGCCGAACGCTGGTACATCTGGCACGATAATTCCCCG 5089 Query 147100 TCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCC 147159 ||||||||||| |||||||| | |||||||| || ||||| ||||| || || || Sbjct 5088 TCGGCCACGTAGAACTGGCAGAACATGTGGCAAGGTGGCAGTGCCATCTCGTTGAGATCA 5029 Query 147160 GCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTTC 147218 || |||||||| ||||| | || | ||| | | | || || ||| | | || | Sbjct 5028 GCCGGGTTCCACGCCGACAGGACAATCCGTCGGTCAGTC-GGATTCGTACGCAGCTTGTG 4970 Query 147219 GATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGT 147277 || ||| | || |||||||| || ||||| ||||| | | ||| |||| || Sbjct 4969 AATCACCTCCGCAAGTTGGTCCACCCCTTGGCCAGTGTAGTCCG-CATGCATGTCCGTGT 4911 Query 147278 ACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTC 147337 || |||| |||||||| | ||||||||||||||| || || || ||||| || ||| | Sbjct 4910 ACTTGGCACCAAAGTGACGCCACTGGAAGCCGTAAACCGGTCCAAGGTC-CCCAACTTCC 4852 Query 147338 TG-TGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCC 147395 | | || | || || | | | | ||||| | || || | | ||||||||||| Sbjct 4851 CGATTCG-GCAGTCCTCGACTATCCAAGTACTCGCGCGATCCATTGCCGTCCCAGATGTG 4793 Query 147396 CA-CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCT 147454 | || | || | | | | | | |||| ||| | ||||||||| || |||| Sbjct 4792 GATATCTTTCTGCTGCAACGTGTCTGCACT-CGTGTCGCCACTGATGAACCACAGTAGCT 4734 Query 147455 CCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG---GAACTGGTCCC 147511 |||| || || | ||| |||||||||||||| |||||||| || || | || | Sbjct 4733 CCTCGGCCACACCTCGCCAGAAGACCCTCTTGGTCGTCAGCAGTGGAAAGACATTGTTTC 4674 Query 147512 TCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCT 147571 |||| | || || ||| | |||||||| |||||||| ||||| || || | ||| | Sbjct 4673 TCAGGCTAAACGTCATCTGCGCTCCAAACACCGACAGCGTACCCGTTCCGGTGCGGTCTT 4614 Query 147572 C 147572 | Sbjct 4613 C 4613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583374460528800