Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5234 93.3 1e-13 >seq5234 Length=8456 Score = 93.3 bits (102), Expect = 1e-13 Identities = 124/171 (73%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| ||| | |||||||||| || || || | || || || ||| || || Sbjct 5353 GAGCGTCTACTGGCTTTTGCTGCCGTTGAGGGCATCTTCTTCTCGGGTTCCTTCTGC-TC 5411 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||||||| | || |||||||| || |||| || || | ||| ||||| || || Sbjct 5412 CATCTTCTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTCAGCTTCTCGAACGAGCTCAT 5471 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAA 443876 |||||| ||||||||| |||| ||||||||||| || || ||| |||| Sbjct 5472 CAGTCGTGACGAGGGTATGCACACGGACTTCGCCTGCCTCCTGTACTCCAA 5522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588019202910315