Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10576 374 1e-98 seq5234 208 8e-49 seq6779 158 1e-33 seq5172 89.7 6e-13 >seq10576 Length=3682 Score = 374 bits (414), Expect = 1e-98 Identities = 1150/1744 (66%), Gaps = 60/1744 (3%) Strand=Plus/Plus Query 78178 GCCTTGGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTAC 78237 || || | |||| |||| ||||||||||| |||||||| ||||||||||| |||| Sbjct 493 GCTTTSGGGCGTCCGCGCATGTAGTACATGCCGGTCTTGAGTCCCTTCTTCCAGGCGTAG 552 Query 78238 AGGTGCATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGG 78297 | |||||| || || ||| | | |||||| | ||| |||||| || ||||| Sbjct 553 AAGTGCATGGACGTGAGTTTGCTGATAGTCGGGTCAGCGATGTGGATGTTCAGAGACTGA 612 Query 78298 GACTGGTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATC 78357 |||| |||||| || || ||||| |||| || || | || | ||| || ||| Sbjct 613 CTCTGGCAGATGTAAGCGCCACGGTCAGCCGACAGATCCAGCACGGCCTTCTGTTTGATC 672 Query 78358 TCCCAGATGGTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCA-GCGCTTGTACGCT 78416 ||||| | || ||| || |||| | | || | ||| || | ||| | | | Sbjct 673 TCCCACACAGTTTTGTACTTGTCCTTGACGTGGTCTGGAATGGCCTTGACCTTCTGCACA 732 Query 78417 C--CCACCGGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTG--ATCTTCT 78472 |||||| | | ||| | ||| | || || ||||| ||| | || Sbjct 733 GATCCACCGTCATTTAGAATCTGATTACGTACTTCTGGTGTCCAG--ATTCCCAGCTCAA 790 Query 78473 GAAGATCCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCA 78532 ||| ||| | ||||| | ||| | || |||||||||||||| ||||| Sbjct 791 TAAGCTCCTTCATCAGGTACTTGTTGACGATCGTAAACTCGCCGGCCAGCACACGGCGGT 850 Query 78533 GGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCG 78592 ||| ||||||| |||||| ||||||| | ||| ||||| |||| |||||| || || | Sbjct 851 TGTACATGTTGGACGTGTAAGGCTCGATGGACTCATTGTTGCCCAGGATCTGAGCTGTGG 910 Query 78593 AGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGA 78652 | || |||||||| ||||| ||||| || || || |||||||| | | | | || Sbjct 911 ACGCCGTCGGCATCGGTGCAACCAGCAGTGAGTTGCGAAGACCGTATTTGATTACGTCAT 970 Query 78653 CCTTTAG----GCC--GTCCCAAAATTCATTCGCCGC---GATCCCCCACATGTCCGGTT 78703 |||| || ||| || ||| | | || || | || ||||||||||| | Sbjct 971 CCTTGAGTGCCGCCCAGTTCCAGAGTCCAGATGCAGGTGTGACGCCCCACATGTCGAACT 1030 Query 78704 GAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGG 78763 | | || |||| || || || |||| |||||||||||| | ||| ||||||| Sbjct 1031 GGAAGACGCCCTTACTGGCAGGGGAGCCCTGGAACGTCTCGTACGGACCCAATTCCTTGG 1090 Query 78764 CGAGTTCGCATG-ACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTG 78822 ||| || |||| || || || |||| ||| | | |||||||||| ||||||| Sbjct 1091 CGATCTC-CATGGACGTCTCCATTGCGGCGTAGTAGATCGTCTCGAAGATGTTCTTGTTG 1149 Query 78823 AGCTCGCGCGCCTTGGT--CTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCA 78880 ||||| | || ||| | ||| ||||||| | | | | ||||| |||| |||| Sbjct 1150 AGCTCACTAGC-TTGCTTGCTC-TCGAACGCATAGTTCATGAGGATGAACGCATCAGCCA 1207 Query 78881 GGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGG 78940 | ||||||||||| ||| | || || || || ||||||||| ||| || ||| | | Sbjct 1208 GACCCTGGACGCCAATACCAATGGGGCGATGACGCATGTTGGACTTCCGAGCCTCTGCTA 1267 Query 78941 TCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCT 79000 || || |||| || ||||| ||| ||||| || |||| ||| ||| | Sbjct 1268 CAGGATAGTAGTTGACGTCAATGACCTTGTTGAGGTTGCGAGTGATCACCTTGACCACTT 1327 Query 79001 CGTACAATTTGGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGAT 79059 | |||| ||| | | || || | | || | | ||| | || || || || Sbjct 1328 CATACAGTTTCTGGTAGTCGAACACGCCCTCGTCC-ACGAACTTGGGCAGCGCCACAGAC 1386 Query 79060 GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA-GAAACCTCGATGATTTCTGTGCACAA 79118 |||| ||||||||| ||| ||| || |||| | | ||| || | || ||| || Sbjct 1387 GCCAAGTTGCACACTGCCACCTCATC-GGGCGACGTGTACTCCATCACCTCGCAGCATAA 1445 Query 79119 ATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTT 79178 || || ||| ||||| | ||||| |||||| ||| ||| |||||||| Sbjct 1446 GTTGCTGGAGCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGGCTGCGTCCTT 1505 Query 79179 GTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTC 79238 |||| ||| | ||| || ||||| | ||| | || | | || ||| | | Sbjct 1506 GTAGAGCATAAAGGGCACTCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCTG 1565 Query 79239 CCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGAC------GTACGTCCGGTACAA 79292 | |||| | || |||| |||| | || | | |||| | |||| Sbjct 1566 CTGGGC---GTTAATGGTCTT---CCGAGCGCGTCCTTCCTTCTCGTACTTTTCATACAG 1619 Query 79293 CTCGTTGAAA---GCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACAT 79349 | | || ||| | ||||||| || ||| || || || |||| || || | Sbjct 1620 CGC-TTCAAACTCGTCTCCCCAGC-AC-TCGTAGAGACCAGGAGCTTCGTTAGGACAGAA 1676 Query 79350 CAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGC 79409 || ||| | | | ||| || ||| ||||||||| || || | ||| || || Sbjct 1677 TAGACTCCACTTACCATTGGCCTCCACTCTCTTCATGAAGAGATCAGGCACCCAGAGCGC 1736 Query 79410 CGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAA 79469 ||| | ||| || || | ||||| ||| |||||| ||||| || || || Sbjct 1737 GTAGAACAAGTCACGAGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGATCCAGGAA 1796 Query 79470 GTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCC 79529 || | | ||| |||||||| ||||||| |||||| || || || || |||||||| || Sbjct 1797 CTCGAACACGTCTGCGTGCCATGGCTCCAAATAGATAGCAAAGGATCCTTTGCGCTTACC 1856 Query 79530 GCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCC 79589 |||||||||| || || || ||||||| ||| || || || |||||||| | ||||| Sbjct 1857 TCCGCCCTGGTCCACATAGCGAGCCGTGTCGTTAAACACACGCAGCATGGGGATAATGCC 1916 Query 79590 GTCGGCGACGCCGTTCGTCCCGTTGAT-TCG-TGTACCGCTCGCCCGAATGTTCGAGCAG 79647 | || | ||| ||||| ||| ||| | | ||| | | || || ||||| | ||| Sbjct 1917 ATTGGAGGAGCCATTCGTGCCGCGGATGTAGCTGTT--GGTGGCTCGGATGTT-GTGCAT 1973 Query 79648 TG-GATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTA 79706 ||| || || || || | ||||||||| ||| |||||| | ||||||||| ||||| Sbjct 1974 ACTGATGCCAATACCTCCCGCCCACTTGGATATGCACGCGCATTGCTTGAGCGTGTCGTA 2033 Query 79707 GATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG--G 79764 |||||||||||||||||| |||| ||| || | ||||| || |||| ||| || | Sbjct 2034 GATGCCCTCGATCGAGTCATCCTGCATTGCCAATAGGAAACAAGAAGACAGCTGAGGACG 2093 Query 79765 TTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATC 79824 | | ||| |||||||||||||| || || ||||||||||||||||||||||| ||| Sbjct 2094 TGG--CGTGCCGGCGTTGAAGAGAGTAGGGGTCGCGTGCGTGAAGAACTTTTGCGACATG 2151 Query 79825 AGATCGTACGTCTCCTTGA-CGCG--CGGGAGGTCGTCGCCGTGGATGCCGACCGCGACG 79881 || ||||||||||| || |||| | ||| |||| ||||||||| | ||| ||| Sbjct 2152 AGCTCGTACGTCTC---GAGCGCGGCCTGGATGTCGCTCTTGTGGATGCCCAGCGCCACG 2208 Query 79882 CGCA 79885 |||| Sbjct 2209 CGCA 2212 Score = 363 bits (402), Expect = 2e-95 Identities = 1127/1719 (66%), Gaps = 40/1719 (2%) Strand=Plus/Minus Query 19119 TGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGACC 19178 |||| || ||| | |||||||| |||| ||| | | | |||||| ||||| | Sbjct 2212 TGCGCGTGGCGCTGGGCATCCACAAGAGCGACATCCAGGCCGCGCTCGAGACGTACGAGC 2153 Query 19179 TGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACA 19238 | ||| || |||||||||||||||||||| || || || ||||||||||| ||| | Sbjct 2152 TCATGTCGCAAAAGTTCTTCACGCACGCGACCCCTACTCTCTTCAACGCCGGCACG--CC 2095 Query 19239 AC--CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296 || || ||| |||| ||||||||| |||| ||| |||||||| || |||||||| Sbjct 2094 ACGTCCTCAGCTGTCTTCTTGTTTCCTATTGGCAATGCAGGATGACTCGATCGAGGGCAT 2035 Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCA 19356 |||||| ||||||||| | |||||| ||| ||||||||| | || ||||| || ||| Sbjct 2034 CTACGACACGCTCAAGCAATGCGCGTGCATATCCAAGTGGGCGGGAGGTATTGGCATCAG 1975 Query 19357 C-TGCTCGAATATCCGGTCGAGTGGTACA-CGA-ATCAATGGGACGAACGGAGTAGCCGA 19413 ||| | || ||||| | | ||| | | ||| || ||||| || || | Sbjct 1974 TATGCAC-AACATCCGAGCCACCA--ACAGCTACATCCGCGGCACGAATGGCTCCTCCAA 1918 Query 19414 CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGG 19473 || || |||| ||||| || || || ||| ||||||| | || || ||||||| || Sbjct 1917 TGGCATTATCCCCATGCTGCGTGTGTTTAACGACACGGCTCGCTATGTGGACCAGGGCGG 1858 Query 19474 CGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGA 19533 || || ||||| || || || || ||||| | |||||||||||||| ||||| | || Sbjct 1857 AGGTAAGCGCAAAGGATCCTTTGCTATCTATTTGGAGCCATGGCACGCAGACGTGTTCGA 1798 Query 19534 TTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCAC 19593 ||||| || |||||| |||||| || ||||| | ||| ||| ||| | ||| Sbjct 1797 GTTCCTGGATCTGCGCAAGAACCACGGCAACGAGCTGCACCGCGCTCGTGACTTGTTCTA 1738 Query 19594 GGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 || | ||| | || || || |||||| ||| || ||| | | | ||| || Sbjct 1737 CGCGCTCTGGGTGCCTGATCTCTTCATGAAGAGAGTGGAGGCCAATGGTAAGTGGAGTCT 1678 Query 19654 GATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTT 19713 | || || ||||| ||||| || ||| || || || | ||| | | | | Sbjct 1677 ATTCTGTCCTAACGAAGCTCCTGGTCTCTACGAGTGCTGGGGAGACGAGTTTGAAGCGCT 1618 Query 19714 GTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTGGTCCGGGCCCGGGACGTCT 19772 ||| | |||| | || || | || |||| | |||| | | | | Sbjct 1617 GTATGAAAAGTACGAGAAGGAAGGACGCGCTCG-GAAGACCATTAACGCCCAGCAGCTGT 1559 Query 19773 GGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACG 19832 || | | |||| | ||| ||||||| || || | ||| ||||||||||| Sbjct 1558 GGTTCGCCATCCTGGACGCGCAGATCGAGACGGGAGTGCCCTTTATGCTCTACAAGGACG 1499 Query 19833 CCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTA 19892 | || ||| |||||| || ||| ||||| | ||| ||||| || |||| | || Sbjct 1498 CAGCCAACCGCAAGTCGAACCAGCAGAACCTGGGCACGATCCGCTCCAGCAACTTATGCT 1439 Query 19893 CTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGT 19952 || | |||||| | ||| || ||| || ||||| || ||||||| || Sbjct 1438 GCGAGGTGATGGAGTACACGTCGCCCGATGAGGTGGCAGTGTGCAACTTGGCGTCTGTGG 1379 Query 19953 GCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCC 20012 ||||| | ||||| | | | ||||||| ||| |||| || ||| | Sbjct 1378 CGCTGCCCAAGTTCGTGGACGAGGGCGTGTTCGACTACCAGAAACTGTATGAAGTGGTCA 1319 Query 20013 GGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGG 20072 ||| |||| || || || || ||||| || |||| || || | | || Sbjct 1318 AGGTGATCACTCGCAACCTCAACAAGGTCATTGACGTCAACTACTATCCTGTAGCAGAGG 1259 Query 20073 CGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACG 20132 | || ||||| || ||||| || || || || | || ||||||||||| ||||| || | Sbjct 1258 CTCGGAAGTCCAACATGCGTCATCGCCCCATTGGTATTGGCGTCCAGGGTCTGGCTGATG 1199 Query 20133 TTTTCATGATGCTCGGCCTCT-CATTCGACGATCC--CAAGGCGCGCGAGCTCAACAAGG 20189 ||||| | | | || | | ||||| || | |||| | | |||||||||||| Sbjct 1198 CGTTCATCCTCAT-GAACTATGCGTTCGA-GAGCAAGCAAG-CTAGTGAGCTCAACAAGA 1142 Query 20190 GCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC---GAACTCGCCAAAG 20246 |||||||||| | | ||| |||| || | ||| ||| | || ||||||| | Sbjct 1141 ACATCTTCGAGACGATCTACTACGCCGCAAT---GGAGACGTCCATGGAGATCGCCAAGG 1085 Query 20247 AGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGG 20306 | || ||||||||||||||| |||| || || || |||| || ||||| | Sbjct 1084 AATTGGGTCCGTACGAGACGTTCCAGGGCTCCCCTGCCAGTAAGGGCGTCTTCCAGTTCG 1025 Query 20307 ACATGTGGGGCGTCAC---TGAGAATGAGTTTTGGAGC------GCCCTCAAGGTTGAGA 20357 |||||||||||||||| || || | |||| | || ||||||| ||| Sbjct 1024 ACATGTGGGGCGTCACACCTGCATCTGGACTCTGGAACTGGGCGGCACTCAAGGATGACG 965 Query 20358 TCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCG 20417 | | | |||| ||||||||||| |||| || || || |||||||| || || || | Sbjct 964 TAATCAAATACGGTCTTCGCAACTCACTGCTGGTTGCACCGATGCCGACGGCGTCCACAG 905 Query 20418 CCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTC 20477 | |||||| |||| ||||| ||| | ||||||| |||||| ||||||| ||| || | Sbjct 904 CTCAGATCCTGGGCAACAATGAGTCCATCGAGCCTTACACGTCCAACATGTACAACCGCC 845 Query 20478 GTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGA-CTTGCAGAAG 20536 || |||||||| ||||| || || |||||| ||||| | || ||| | || Sbjct 844 GTGTGCTGGCCGGCGAGTTTACGATCGTCAACAAGTACCTGATGAAGGAGCTTATTG-AG 786 Query 20537 ATCGATATGTGGTCGCCCAAAATTAAG-AATGAAATTGTCCGAGCCGGCGGGAGCGTCC- 20594 | | || ||| | ||| || || | ||| | ||| | | ||| || || | Sbjct 785 CTGGGAATCTGGAC-ACCAGAAGTACGTAATCAGATTCTAAATGACGGTGGATCTGTGCA 727 Query 20595 --AGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCC 20652 ||| || || || | || ||||||||| |||| || || ||||| ||| Sbjct 726 GAAGGTCAAGGCCATTCCAGACCACGTCAAGGACAAGTACAAAACTGTGTGGGAGATCAA 667 Query 20653 ACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTC 20712 ||||||| | | | || || |||| || || ||||| |||||| |||| ||||| Sbjct 666 ACAGAAGGCCGTGCTGGATCTGTCGGCTGACCGTGGCGCTTACATCTGCCAGAGTCAGTC 607 Query 20713 GCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGG 20772 || || || ||| | | |||| | || || | |||||||| | |||| Sbjct 606 TCTGAACATCCACATCGCTGACCCGACTATCAGCAAACTCACGTCCATGCACTTCTACGC 547 Query 20773 CTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 |||| | ||||| |||||||| ||||||||||| |||| Sbjct 546 CTGGAAGAAGGGACTCAAGACCGGCATGTACTACATGCG 508 >seq5234 Length=8456 Score = 208 bits (230), Expect = 8e-49 Identities = 554/830 (67%), Gaps = 31/830 (4%) Strand=Plus/Plus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672 || |||||| | | |||||||| ||||| | ||||| ||||||||| |||||| Sbjct 4984 TCCTTCTGGACTGCTGAGGAGATCGACCTGGTGCACGACCTCAAGGATTGGACCAAGCTT 5043 Query 59673 AATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGA 59732 | || |||||| || ||||||||| || || ||||||||||| || || || ||| Sbjct 5044 ACGGACAACGAGCGCCACTTCATCAAGCACGTGCTCGCCTTCTTCGCAGCCAGCGACGGA 5103 Query 59733 ATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGG 59792 || |||| || || | | ||||||||| || || || ||| | | ||||| || Sbjct 5104 ATCGTGAACGAGAACTTGGCCATGAACTTCAGTAATGAAGTGCAGGTGCCTGAGGCTCGA 5163 Query 59793 TCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCAT 59851 | ||||||| | ||| ||| || |||| |||||||| ||| ||||| || | Sbjct 5164 TGCTTCTACGGATTCCAGATCG-CCATCGAGAACATCCACTCGGAGGTCTACTCACTGCT 5222 Query 59852 GATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGA- 59910 || || | || |||||||| || ||||||| | |||||| ||||| || |||| Sbjct 5223 CATTGACACGTACATCAAGGATGCGATCGAGAAGGATCATCTGTTGCGTGCGATTGAGAC 5282 Query 59911 CGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAG----TCCTGGA 59966 | | || || || | | |||||| | ||||| | ||||| || | || || Sbjct 5283 CATTCCGTGC-GTCACGAAGAAAGCACACTGGGCGCTCAAGTGG-TGCGACCCTCGTGTG 5340 Query 59967 GCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGC 60026 | || | | | ||||| | |||||||| ||| || || ||||||||||| || Sbjct 5341 TCCTCCTACCCGGAGCGTCTACTGGCTTTTGCTGCCGTTGAGGGCATCTTCTTCTCGGGT 5400 Query 60027 TCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCC 60086 || ||||| | || |||||||| || ||||||||||||||||| || || || ||||| Sbjct 5401 TCCTTCTGCTCCATCTTCTGGCTTAAGAAGCGTGGCCTCATGCCTGGACTCAGCTTCTCG 5460 Query 60087 AACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCA 60146 |||||||| || || |||||||| | || ||| || || || | | || | | Sbjct 5461 AACGAGCTCATCAGTCGTGACGAGGGTATGCACACGGACTTCGC-CTGCCTC-CTGT--A 5516 Query 60147 CACCTATTGGAAAAATGCCCTTCCAAGGATA------TTCACAAGATTGTTCAGT---GG 60197 | || | | | | || || ||| | | ||| |||| ||| || | Sbjct 5517 CTCCAAGCTGGTCACTAAGCTGCC--GGAGAGCCGCGTGCACGAGATCATTC-GTGACGC 5573 Query 60198 GCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATG 60257 | | |||| | ||| ||||||| | || |||| || | || || || ||| Sbjct 5574 GGTGGTGA--TTGAGCACGAGTTCGTGCGTGACTCGCTGCCGGTGGAGCTGATTGGCATG 5631 Query 60258 GACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTT 60317 || | || ||| ||||||||| |||| || || ||||| || || | | || Sbjct 5632 AACTCGGGCCTCATGTGCCAGTACATTGAGTTCGTTGCTGACCGTCTGCTGTACTCGCTT 5691 Query 60318 GGAGAAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGT 60375 || | | ||| || ||| || || |||||||||||||||||||| | ||||| Sbjct 5692 GGTG--TGTCCAAGATCTACCACGCCAAGAACCCTTTCGACTGGATGGACATGATCTCTC 5749 Query 60376 TGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 | | || |||||||||||||| |||||||| || || || || || ||| Sbjct 5750 TCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTGGGCGAGTACTCCAAG 5799 >seq6779 Length=4860 Score = 158 bits (174), Expect = 1e-33 Identities = 551/844 (65%), Gaps = 19/844 (2%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | || |||||| | | ||||||| | || || | || | Sbjct 1208 TGTACAAGAAGGCGGAGGCCTCCTTCTGGACGGCCGAGGAGCTGGAYCTGGTGCACGATC 1149 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | || || |||| || |||| || |||||| || ||||||||| || ||||| | Sbjct 1148 TCAACGACTGGGCAAAACTCACAGACAACGAGCGTCACTTCATCAAGTACGTTCTGGCGT 1089 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| || ||||| || || || | || || | | ||||||||| || || | Sbjct 1088 TCTTCGCTGCTAGTGACGGTATCGTCAACGAGAACCTGGCCATGAACTTCAGTAATGAAG 1029 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||||| | || || || | ||||||| | ||| ||| | | |||| ||||||| Sbjct 1028 TGCAGATACCGGAAGCTCGCTGCTTCTACGGCTTCCAGATCGCT-ATCGAGAATATCCAC 970 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||| ||||| | || || | | ||||||| | | ||||| | Sbjct 969 TCGGAGGTGTATTCGCTGCTTATTGACACATACATCAAGGACGCCGTGGAGAAAGACCAC 910 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 || | ||||| || ||||| ||| || | | || || | ||||| | | Sbjct 909 TTGCTACGTGCTATCGAGACTATCCCATGTGTCCAGAAGAAGGCCAACTGGGCGCTAAAA 850 Query 59952 TGGATGAGTCCTG---GAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGG 60006 ||| || | || | | | | || | ||| | ||||| |||| || || ||| |||| Sbjct 849 TGG-TGTGACCCGCGTGTGTCGTCGTACGCAGAGCGTCTGCTAGCGTTCGC-TGCAGTGG 792 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 |||| |||||||| || || || || ||| | |||||||||| || ||||| || || | Sbjct 791 AAGGTATCTTCTTTTCGGGGTCATTTTGTTCCGTTTTCTGGCTTAAGAAGCGCGGTCTTA 732 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || ||||| ||||| |||||| |||| || || |||||| | || ||| | Sbjct 731 TGCCTGGTCTGAGCTTCTCAAACGAGATGATCAGTCGTGATGAGGGCATGCACACGGATT 672 Query 60127 TTGCAGTGACGC-TCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 | || ||| | || || | ||| | | || || | | | ||| || Sbjct 671 TCGC-GTGCTTAATGTACTCGAAGCTAGTTAACAAGATACCGGAGAGCCGTGTCCACGAG 613 Query 60186 ATTGTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAA 60244 || ||| ||| ||| | | ||| ||||||| | || |||| || | Sbjct 612 ATCATTCGCGATGCT-GTGGTGATTGAGCACGAGTTCGTGTGCGACTCGCTGCCTGTGGA 554 Query 60245 ACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT 60304 || || |||||| || | | ||| || |||||| ||||||| ||||| || || Sbjct 553 GCTTATCGGTATGAACTCAGCGCTCATGTGTCAATACATTGAGTTTGTGGCGGATCGTCT 494 Query 60305 CATGGCC-CAGTTTGGAGAAGGACCAA--TTTACGGCGTGAATAACCCTTTCGACTGGAT 60361 | | || | ||| | |||| | ||| |||||| ||||| ||||||||||| Sbjct 493 ACTATACTCACT---GAGTGTGTCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGAT 437 Query 60362 GGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTC 60421 ||| | ||||| || | || ||||| |||||||| |||||||| || || || ||||| Sbjct 436 GGACATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGTGTGGGCGAGTATTC 377 Query 60422 AAAG 60425 ||| Sbjct 376 CAAG 373 >seq5172 Length=6496 Score = 89.7 bits (98), Expect = 6e-13 Identities = 279/421 (66%), Gaps = 21/421 (5%) Strand=Plus/Plus Query 60016 TCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCC 60075 ||||||| ||||||||||| | |||||||||| || || || || || ||||| || | Sbjct 2940 TCTTCTCGGGCTCGTTCTGCTCAGTTTTCTGGCTTAAGAAACGCGGTCTTATGCCTGGTC 2999 Query 60076 TGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGA 60135 |||| ||||| |||||| |||| || ||||||||| | || ||| || || ||| Sbjct 3000 TGAGCTTCTCAAACGAGATGATCAGTCGTGACGAGGGCATGCACACGGATTTCGC-GTG- 3057 Query 60136 CGCTCTATTCACACCTAT--TGGAAAA-ATGCCCTTCCAAGGA----TATTCACAAGATT 60188 || || || | | ||| || | || | || || | | || |||| Sbjct 3058 --CTTAATGTACTCGGAAGCTGGTTAACAAGC--TACCGGAGAGTCGTGTCCATGAGATC 3113 Query 60189 GTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACT 60247 ||| ||| ||| | | ||| ||||||| | || |||| || | || Sbjct 3114 ATTCGCGACGCT-GTGGTGATTGAGCACGAGTTCGTATGCGACTCGCTGCCTGTGGAGCT 3172 Query 60248 CATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCAT 60307 || |||||| || | | ||| || |||||| ||||||| ||||| || || | Sbjct 3173 TATCGGTATGAACTCAGCGCTCATGTGTCAATACATTGAGTTTGTGGCGGATCGTCTACT 3232 Query 60308 GGCC-CAGTTTGGAGAAGGACCAA--TTTACGGCGTGAATAACCCTTTCGACTGGATGGA 60364 | || | ||| | |||| | ||| |||||| ||||| |||||||||||||| Sbjct 3233 ATACTCACT---GAGTGTGTCCAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGA 3289 Query 60365 GACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAA 60424 | ||||| || | || ||||| |||||||| |||||||| || || || ||||| || Sbjct 3290 CATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGTGTGGGCGAGTATTCCAA 3349 Query 60425 G 60425 | Sbjct 3350 G 3350 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 60276 CAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAA--TTT 60333 ||||||||| ||||||| |||||||| || | | | || | | |||| | | Sbjct 5969 CAGTACATTGAGTTTGTGGCGGACCGTCTACTATACTCACTGGGTGT--GTCCAAGATCT 5912 Query 60334 ACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACT 60393 || |||||| ||||| |||||||||||||| | ||||| || | || ||||| |||| Sbjct 5911 ACAACGTGAAGAACCCGTTCGACTGGATGGACATGATCTCACTGCAGGGCAAGACAAACT 5852 Query 60394 TCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 |||| |||||||| || || || ||||| ||| Sbjct 5851 TCTTCGAGAAGCGTGTGGGCGAGTATTCCAAG 5820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548418063930480