Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq10576 286 4e-72 seq6779 167 3e-36 seq7887 154 2e-32 seq7195 140 4e-28 seq5421 140 4e-28 seq9710 129 7e-25 seq5234 123 3e-23 seq10590 114 1e-20 seq13260 89.7 6e-13 >seq10576 Length=3682 Score = 286 bits (316), Expect = 4e-72 Identities = 934/1432 (65%), Gaps = 42/1432 (3%) Strand=Plus/Plus Query 80036 GCGTCCGCAGAT--AGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||||| || |||||||||| |||||||| |||||||||||| |||| | |||||| Sbjct 501 GCGTCCGCGCATGTAGTACATGCCGGTCTTGAGTCCCTTCTTCCAGGCGTAGAAGTGCAT 560 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 || |||| || | || |||| | ||| |||||||||||||||| ||| || Sbjct 561 GGACGTGAGTTTGCTGATAGTCGGGTCAGCGATGTGGATGTTCAGAGACTGACTCTGGCA 620 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 |||| |||| ||||| || |||| || || | | | ||| ||| || ||||| || Sbjct 621 GATGTAAGCGCCACGGTCAGCCGACAGATCCAGCACGGCCTTCTGTTTGATCTCCCACAC 680 Query 80214 TGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCA-GA--TTTTGCACACTGCC 80267 || ||| |||| || | | ||||||||| || || || |||||| || Sbjct 681 AGTTTTGTACTTGTCCTT--GACG-TGGTCTGGAATGGCCTTGACCTTCTGCACAGATCC 737 Query 80268 ACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATC 80327 |||||| |||| ||| ||||| | ||| | ||||||| || |||| || || Sbjct 738 ACCGTCATTTAGAATCTGATTACGTACTTCTGGTGTCCAGATTCCCAGCTCAATAAGCTC 797 Query 80328 TTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAG 80387 |||| |||| |||||| | || |||||| || || || || || |||| Sbjct 798 CTTCATCAGGTACTTGTTGACGATCGTAAACTCGCCGGCCAGCACACGGCGGTTGTACAT 857 Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||| | ||||||||||| | | ||| ||||| || ||||||||||| ||| |||||| Sbjct 858 GTTGGACGTGTAAGGCTCGATGGACTCATTGTTGCCCAGGATCTGAGCTGTGGACGCCGT 917 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTT---GATATCCTCG-- 80502 ||||||||| | |||| |||||| || || || |||| || | | ||||| | Sbjct 918 CGGCATCGGTGCAACCAGCAGTGAGTTGCGAAGACCGTATTTGATTACGTCATCCTTGAG 977 Query 80503 ---CGCAAATCTGACCAAAAATCAACCCCAACGCTGTGA--CCCCACATGTCGTGCTGCA 80557 ||| | | ||| | || || | ||||| |||||||||||| ||| | Sbjct 978 TGCCGCCCAGTT--CCAGAGTCCAGATGCA--GGTGTGACGCCCCACATGTCGAACTGGA 1033 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 ||| ||||| || || || ||| ||||||||||||||| ||| |||||| | Sbjct 1034 AGACGCCCTTACTGGCAGGGGAGCCCTGGAACGTCTCGTACGGACCCAATTCCTTGGCGA 1093 Query 80618 GCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 ||| ||| |||||| || |||| || || ||| |||| | |||||| | Sbjct 1094 TCTCCATGGACGTCTCCAT---TGCGGCGTAGTAGATCGTCTCGAAGATGTTCTTGTTGA 1150 Query 80675 CACCGCGCGCCTG-TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733 | | || || | | || ||||||| || ||| | |||||| | |||||||| Sbjct 1151 GCTCACTAGCTTGCTTGCTC-TCGAACGCATAGTTCATGAGGATGAACGCATCAGCCAGA 1209 Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATT 80793 ||||| ||||| || | || ||||| || ||| |||| || | ||||| | | Sbjct 1210 CCCTGGACGCCAATACCAATGGGGCGATGACGCATGTTGGACTTCCGAGCCTCTGCTACA 1269 Query 80794 GGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCA 80853 || || |||| || ||||| ||| |||||||| || | ||| || ||| Sbjct 1270 GGATAGTAGTTGACGTCAATGACCTTGTTGAGGTTGCGAGTGATCACCTTGACCACTTCA 1329 Query 80854 TGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCC 80913 | |||||||| ||||||| | | | | ||| || || || || |||||| Sbjct 1330 TACAGTTTCTGGTAGTCGAACACGCCCTCGTCCACGAACTTGGGCAGCGCCACAGACGCC 1389 Query 80914 AGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTA 80973 | |||||||| |||||||| || | || |||| | | || ||| || || Sbjct 1390 AAGTTGCACACTGCCACCTCATCGGGCGACGTGTACTCCATCACCTCGCAGCATAAGTTG 1449 Query 80974 GAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAG 81033 || || || |||||||| | |||||| |||||| |||| |||||||||||| Sbjct 1450 CTGGAGCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGGCTGCGTCCTTGTAG 1509 Query 81034 CACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGC 81093 ||| | || || ||||||| ||| | | ||||||||| ||| | || | Sbjct 1510 AGCATAAAGGGCACTCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCTGCTGG 1569 Query 81094 GCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAA 81152 || || | ||| || ||||| | | ||||| | || ||| | || || Sbjct 1570 GCGTTAATGGTCTTCCGAGCGCGTCCTTCCTTCTCGTACTTTTCATACAGC-GCTTCAAA 1628 Query 81153 CTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTC 81212 || | | || || ||| | || |||||||| || | || ||| | Sbjct 1629 CTCGTCTCCCCAGCACTCGTAGAGACCAGGAGCTTCGTTAGGACAGAATAGACTCCACTT 1688 Query 81213 GGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTC 81272 | | ||| || ||||||||| ||||| | |||||| ||| ||||| ||| Sbjct 1689 ACCATTGGCCTCCACTCTCTTCATGAAGAGATCAGGCACCCAGAGCGCGTAGAACAAGTC 1748 Query 81273 GCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATG 81330 || |||||| | ||| | || ||||| ||||| || || || || | | | Sbjct 1749 ACG--AGCGCGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGATCCAGGAACTCGAACACG 1806 Query 81331 TCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGG 81387 || || ||||||||||||| ||| | || | || || ||||| || || |||||| Sbjct 1807 TCTGCGTGCCATGGCTCCAAATAGATAGCAAAGGATCCTTTGCGCTTACCTCCGCCCTGG 1866 Query 81388 TTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439 | || || || || || ||||||| ||||||| ||| ||||| || |||| Sbjct 1867 TCCACATAGCGAGCCGTGTCGTTAAACACACGCAGCATGGGGATAATGCCAT 1918 >seq6779 Length=4860 Score = 167 bits (184), Expect = 3e-36 Identities = 362/537 (67%), Gaps = 13/537 (2%) Strand=Plus/Minus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 1217 TGTGGCAGATGTACAAGAAGGCGGAGGCCTCCTTCTGGACGGCCGAGGAGCTGGAYCTGG 1158 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAGG-AAC-AGC---ACTTCATCAA 64433 | ||||||| |||||||| ||| |||||||| ||| ||| |||||||||| Sbjct 1157 TGCACGATCTCAACGACTGGGCAAA-----ACTCACAGACAACGAGCGTCACTTCATCAA 1103 Query 64434 GTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAA 64493 || || || || |||||||| | |||||||| || || ||||| ||| | | || Sbjct 1102 GTACGTTCTGGCGTTCTTCGCTGCTAGTGACGGTATCGTCAACGAGAACCTGGCCATGAA 1043 Query 64494 TTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAA 64553 || | || || || ||||| || || || || | ||||| | | ||| || Sbjct 1042 CTTCAGTAATGAAGTGCAGATACCGGAAGCTCGCTGCTTCTACGGCTTCCAGATCGCTAT 983 Query 64554 CGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGT 64613 ||| | ||| || ||| ||||||||| | ||||||| | | ||| | || Sbjct 982 CGAGAATATCCACTCGGAGGTGTATTCGCTGCTTATTGACACATACATCAAGGACGCCGT 923 Query 64614 CGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGA 64673 ||||| || || | | ||||| |||||| | || ||| || ||||| | Sbjct 922 GGAGAAAGACCACTTGCTACGTGCTATCGAGACTATCCCATGTGTCCAGAAGAAGGCCAA 863 Query 64674 ATGGGCCATCCGGTGG-ATGA--ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTT 64730 ||||| | ||| ||| |||| |||||||| | ||||||| ||| || Sbjct 862 CTGGGCGCTAAAATGGTGTGACCCGCGTGTGTCGTCGTACGCAGAGCGTCTGCTAGCGTT 803 Query 64731 TGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAA 64790 || |||||||| || |||||||| |||||||| ||||| |||||||||| || || Sbjct 802 CGCTGCAGTGGAAGGTATCTTCTTTTCGGGGTCATTTTGTTCCGTTTTCTGGCTTAAGAA 743 Query 64791 GCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||| || || ||||| |||||| || || |||||| ||||| ||| || ||||| Sbjct 742 GCGCGGTCTTATGCCTGGTCTGAGCTTCTCAAACGAGATGATCAGTCGTGATGAGGG 686 >seq7887 Length=10481 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| ||||| |||||||| || || || || || ||| | Sbjct 998 AATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 1057 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || ||||||| ||| | ||| ||||| |||||||||||||| || || || ||||| Sbjct 1058 GGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCA 1117 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || || || ||||| |||||||| | || || || | ||||| || Sbjct 1118 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCGGACTACAA 1177 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || ||||||| || ||||| Sbjct 1178 CATCCAGAAGGAGTCGACCCTGCACCTTGTGCTGCGTCTGCGTGGTGG 1225 >seq7195 Length=47515 Score = 140 bits (154), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| ||||| || || || ||| | Sbjct 44585 ATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACGATTACCCTGGACGTGGAGCCTTCG 44644 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || || ||||||||||| || || || || |||||| Sbjct 44645 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 44704 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| || ||||| | ||| || || ||| ||||| || Sbjct 44705 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 44763 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || |||||||| || || ||||||| || || ||| Sbjct 44764 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGCGGA 44812 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || |||||||| ||||| || || || ||| | Sbjct 44357 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATTACCCTGGACGTGGAGCCTTCG 44416 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || || ||||||||||| || || || || |||||| Sbjct 44417 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 44476 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| || ||||| | ||| || || ||| ||||| || Sbjct 44477 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACAA 44535 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || ||||||| || ||||| Sbjct 44536 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGTGG 44583 >seq5421 Length=2020 Score = 140 bits (154), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 1143 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 1202 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || |||||||||||||| || || || || |||||| Sbjct 1203 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 1262 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| || || || ||| ||||| || Sbjct 1263 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGC-GACTACAA 1321 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| ||||| || || || || | ||||||||||| ||| Sbjct 1322 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGTCTTCGCGGCGGA 1370 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || |||||||| || || || || || ||| | Sbjct 915 ATGCAGATCTTCGTGAAGACGCTAACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 974 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || |||||||||||||| || || || || |||||| Sbjct 975 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 1034 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||||| || || || ||| ||||| || Sbjct 1035 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACGCTGAGC-GACTACAA 1093 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | ||||| || ||||| Sbjct 1094 CATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGTCTGCGTGGTGG 1141 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || |||||||| || |||||||| || || || || || ||| | Sbjct 687 ATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 746 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || |||||||||||||| || || || || |||||| Sbjct 747 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 806 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||| ||||| || ||||||| || || || || || || Sbjct 807 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACACTGAGTGATTACAAC 866 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || ||||||| || ||||| Sbjct 867 ATCCAGAAGGAGTCTACGCTGCACCTGGTACTGCGTCTGCGTGGTGG 913 >seq9710 Length=10376 Score = 129 bits (142), Expect = 7e-25 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| | || |||||||| || || || || || ||| | Sbjct 1056 ATCATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 997 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| ||||||||||| ||||| || || ||| Sbjct 996 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGARGGAATCCCGCCTGAC 937 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| || ||||| | || || || | ||||| Sbjct 936 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTCTCGGACTAC 877 Query 27583 AATGTCCAAAAGG 27595 || ||||||||| Sbjct 876 AACATCCAAAAGG 864 >seq5234 Length=8456 Score = 123 bits (136), Expect = 3e-23 Identities = 349/533 (65%), Gaps = 5/533 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| ||| || |||||||| | |||||| | || || | Sbjct 4955 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATCGACCTGG 5014 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || |||| || ||| || || | | ||| || | |||||||||||| Sbjct 5015 TGCACGACCTCAAGGATTGGACCAAGCTTA-CGGACAACGAGCGCCACTTCATCAAGCAC 5073 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || ||||||||| | || |||||||| ||| ||||| |||| | | || || Sbjct 5074 GTGCTCGCCTTCTTCGCAGCCAGCGACGGAATCGTGAACGAGAACTTGGCCATGAACTTC 5133 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || ||| | || ||||| || | ||||| | | ||| | ||| Sbjct 5134 AGTAATGAAGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGATTCCAGATCGCCATCGAG 5193 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| || || || | ||||||| || | |||| | ||||| Sbjct 5194 AACATCCACTCGGAGGTCTACTCACTGCTCATTGACACGTACATCAAGGATGCGATCGAG 5253 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 |||||| ||||| | || || ||||| | || || || || || || | ||| Sbjct 5254 AAGGATCATCTGTTGCGTGCGATTGAGACCATTCCGTGCGTCACGAAGAAAGCACACTGG 5313 Query 64678 GCCATCCGGTGGATGAA---TCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| | ||||| ||| || | ||||||| |||||||| Sbjct 5314 GCGCTCAAGTGGTGCGACCCTCGTGTGTCCTCCTACCCGGAGCGTCTACTGGCTTTTGCT 5373 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 || || || || ||||| || || || ||||| || || |||||||| || ||||| Sbjct 5374 GCCGTTGAGGGCATCTTCTTCTCGGGTTCCTTCTGCTCCATCTTCTGGCTTAAGAAGCGT 5433 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| || || || ||||||||||| ||| ||| |||||||| Sbjct 5434 GGCCTCATGCCTGGACTCAGCTTCTCGAACGAGCTCATCAGTCGTGACGAGGG 5486 >seq10590 Length=17674 Score = 114 bits (126), Expect = 1e-20 Identities = 205/297 (69%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 31954 GATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTG 32013 |||| | |||| || | ||| |||| || || |||||| || ||||| ||||| Sbjct 11107 GATAACCAGCGATCGCTGCCATCGGTGGTTGATGGTCTCAAGATCTCGCAGCGGAAGGTT 11166 Query 32014 ATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGC 32073 | | ||| || | ||| || || | || || |||| ||||| |||||| | || Sbjct 11167 CTTTTCGCGTGTATGAAGCGCAAGCTTACAAGCGAGGTGAAAGTGGCCCAGCTGGCAGGT 11226 Query 32074 TAC-GTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGT 32132 ||| | || ||||| ||||| ||||| ||||| || || || | || || ||||| Sbjct 11227 TACTGCAGC-GAGCACACGGCTTATCATCACGGAGAAGCTTCATTGCACTCGACGATTGT 11285 Query 32133 CAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACA 32192 |||| | || ||| ||||||| || | || ||||| || | | || || || || Sbjct 11286 CAACATGGCGCAGGACTTTGTGGGATCTAACAACCTCCCGCTATTGTATCCGTCAGGTCA 11345 Query 32193 GTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249 |||||| || || || ||||||||||||||||| || | || ||||||||||| Sbjct 11346 GTTTGGTACTCGACTACAAGGTGGCAAGGATGCTGCTAGTCCTCGATACATCTTCAC 11402 >seq13260 Length=2999 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564 || || || || || ||||||||||| || ||||| ||||| ||||| || ||||||| Sbjct 1 GAAGGCATCCCGCCTGACCAGCAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGC 60 Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624 || || || ||||| || |||| ||||| || || || || || || |||||||| Sbjct 61 CGCACGCTGAGTGACTACAACATCCAGAAGGAGTCTACGCTGCACCTGGTACTGCGTCTT 120 Query 27625 CGCGGTGGA 27633 ||||| ||| Sbjct 121 CGCGGCGGA 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570199424725040