Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq12351 120 2e-22 >seq12351 Length=7116 Score = 120 bits (132), Expect = 2e-22 Identities = 173/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 29635 GAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG 29694 |||||| || || ||||||||||||| || || ||||| || || || | ||| Sbjct 5281 GAGCTGCTTCTGAAGTGGTTCCACGTGGTTTAGATACACGTGCGCGTCACCGATAACGTG 5222 Query 29695 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29754 || ||||| || |||| || || || || || || | | ||| || || | ||| Sbjct 5221 GATGAACTCGCCAGGTTTCAGTCCAGTCACTTGCGCAACAAGCCGCGTCAGCAGCGCGTA 5162 Query 29755 GCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 |||||||||||| || ||||| || || |||||||| | || | |||||| | |||||| Sbjct 5161 GCTGGCGATGTTGAATGGCACGCCAAGTCCCATGTCGGCCGAACGCTGGTACATCTGGCA 5102 Query 29815 CGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGGC 29871 ||| | || |||||| |||||| ||||| | ||||| ||||| || || || || Sbjct 5101 CGATAATTCCCCGTCGGCCACGTAGAACTGGCAGAACATG---TGGCAAGGTGGCAGTGC 5045 Query 29872 CAT 29874 ||| Sbjct 5044 CAT 5042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406086141575362