Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cactorum_20[genbank_20GCA_5F002081965.1_202017-04-07] 15,567 sequences; 67,815,075 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq6779 84.2 2e-11 >seq6779 Length=4860 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || ||||| ||||| || | ||||| || || || ||||| || ||||| ||||| Sbjct 935 ATGTATGTGTCAATAAGCAGCGAATACACCTCCGAGTGGATATTCTCGATAGCGATCTGG 994 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || || || || || | |||||| | | || || |||||| || | | || | Sbjct 995 AAGCCGTAGAAGCAGCGAGCTTCCGGTATCTGCACTTCATTACTGAAGTTCATGGCCAGG 1054 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957 || ||||| || ||||| ||||||||||| ||||| || ||||| || || || || || Sbjct 1055 TTCTCGTTGACGATACCGTCACTAGCAGCGAAGAACGCCAGAACGTACTTGATGAAGTG 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521386524953800