Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq41581 302 4e-77 seq56688 280 1e-70 seq42745 205 8e-48 seq42744 205 8e-48 seq62410 161 9e-35 seq62796 152 5e-32 seq10229 140 3e-28 seq7695 140 3e-28 seq51638 136 4e-27 seq1442 127 2e-24 >seq41581 Length=4797 Score = 302 bits (334), Expect = 4e-77 Identities = 1216/1893 (64%), Gaps = 41/1893 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||||||||| || |||| ||||||| || ||| ||| | || |||||||| Sbjct 2391 CTTGTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCC 2332 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| || ||| ||||||| ||||| || || |||||||| | || | |||| Sbjct 2331 GGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGAGCTTGCTGATGGTCGG 2272 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | |||| | |||| |||||||||||| || |||| || || ||||| | Sbjct 2271 GTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGCCGA 2212 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 || | | || | | | || ||||| || ||||||||| | | ||| | Sbjct 2211 CAGGTCCAGCACCGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTTGACGTG 2152 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 ||| |||| | || |||| || || || | | || | |||| || | Sbjct 2151 GTCCGGGATCGCCTTGACATTCTGCACAGAGCCACTGTCGTTCAAGATCTGGTTGCGCA- 2093 Query 22405 CGTATCGT-TCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCA-CT 22462 ||| | |||| | |||| || ||| || || | ||| | ||| || | | Sbjct 2092 CGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTTGTTGACGATCG 2033 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 |||| ||| || | || || ||||| | ||| |||||||| ||| |||| |||| ||| Sbjct 2032 TGAA-CTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGCTCGATAGAC 1974 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || |||||||| || ||||| || || ||||| |||||||| || |||| ||| |||||| Sbjct 1973 TCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCACCAGCAGCGAG 1914 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGA 22641 || | || |||||||| || | ||| |||||| | | ||||| ||||| | | || Sbjct 1913 TTGCGCAGTCCGTGCTT-GATCACGTCCTCCTTGAGCGTAGCCCAGTTCCACATACCCGA 1855 Query 22642 CGGCG---TCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698 || || | || | ||||||| ||| | || || | ||| || || || ||| Sbjct 1854 CGACGGGGTGAC---GCCCCACATGTCGAACTGGAAGATGCCCTTGCTGGCGGGCGAGCC 1798 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT-CGCCTCCAACGCGC 22757 | | |||| |||||||| || | | ||| | || || | || ||||| || Sbjct 1797 CTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CATCGACGTCTCCATAGCAG 1739 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817 | || || || ||||||||||| |||||||| | || ||| |||| ||| ||| Sbjct 1738 CATAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACG 1679 Query 22818 GCATACG-CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 | || ||| | | ||||||||||| | ||||| ||||| || ||||| || ||| Sbjct 1678 -CGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATGCCGATGGGGCGG 1620 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | || || ||| |||||| || || || | || ||||| || Sbjct 1619 TGGCGCATGTTGGACTTGCGCGCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTG 1560 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC 22996 || ||||| | ||| || | || || | | ||| | |||| || Sbjct 1559 TTTAAGTTGCGGGTGACCACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAAACTCC- 1501 Query 22997 GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 || | || |||||| | || | || || | ||||| || ||||||||||| Sbjct 1500 --TTCCTCCACGAACTTGGGCAGCGCCACAGACGCCAAGTTGCACACAGCCACCTCGTCC 1443 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 |||||||| || | | || |||| ||||| | |||||||| | || Sbjct 1442 GGCGACGTGTATTCCATCACCTCACAGCATAAGTTGCTGGAGCGGATCGTGCCGAGGTTC 1383 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 |||||| || || ||| || |||||||| | ||| | ||| ||||||||| Sbjct 1382 TGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGCACTCCCGTCTCG 1323 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG-TGAACACGTCGCACGTACCT 23235 | ||| | || | || || ||||| ||| ||| ||| | | || | | | Sbjct 1322 ATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTCTTGCGGGCGCGT 1263 Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 ||| | | ||||||||||| || | || || |||||| | || | || || || Sbjct 1262 CCCTCCGT-CTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAGCACTCATAGAG 1204 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTCT 23352 || || | | | || || | ||||||||| | | |||| ||| || | | Sbjct 1203 TCCAGGGGCCTCGTTAGGGCAAAACAGACTCCACTT---GCCATTGGCTTCCACCCTCTT 1147 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || ||||| || | ||| || ||||||||||| || || ||||| | ||| || Sbjct 1146 CATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCACGAGCGCGGTGCAACTCGTT 1087 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 ||| |||||| | ||||| || || ||||| || || ||||| ||||| | ||| Sbjct 1086 ACCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAGGCTCCAAGTA 1027 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | ||| || | |||| | ||| |||||||| || ||||| || || |||| ||| Sbjct 1026 GATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCACGTACCGCGCGGTGTCGTT 967 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 |||| | ||||| || | || || ||||||| |||| | || ||| | | Sbjct 966 AAACACCCGCAGCATGGGGATGATGCCATTGGACGAGCCG--TTCG--TGCCTCGGATGT 911 Query 23593 ACCTTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648 | || || ||||| | |||||| | || || || |||||| || |||| || | Sbjct 910 AGCTGTTCGTGGCTCGGATGTTGTGCATACTGATGCCAATACCTCCGGCCCATTTAGAGA 851 Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708 | || || || || | |||||||| ||||| || || ||| |||| | || | Sbjct 850 TACAGGCACACTGCTTTAACGTGTCGTAAATGCCTTCAATTGAGTCGTCTTGCATGGCCA 791 Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768 | ||| ||||| |||| ||| | ||||| |||| || ||||||||| ||| Sbjct 790 ATAGGAAGCACGACGACAGTTGAGGGCGCGGCGTGCCGGCGTTAAAAAGTGTCGGGGTGG 731 Query 23769 CGTGCGTAAAGTATCCATT--CGACATTAGATTGTACGTGTCGATGGCGGCATCAATG-T 23825 | ||||| || | |||| |||||| || | |||||| || | ||| || ||||| | Sbjct 730 CATGCGTGAA--AAACATTTGCGACATGAGCTCGTACGTCTCCAGGGCAGCCGCAATGTT 673 Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGA 23885 |||| ||| || || | || |||||||| ||||| | || || | ||| ||| Sbjct 672 GCTCT-TGTGGATGCCAAGCGCCACGCGCATAATCATTTGCTGCGGACGCTCCACCACTT 614 Query 23886 CGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGT 23945 ||| || | ||| || || ||| | | |||||||| ||||| ||||| || | Sbjct 613 TGCCATTTACGCGGAAGAGGTAGCCACGCTCGAGAGTTTTAAACCCAAAGTAGTCGTAAT 554 Query 23946 TAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 ||||| || ||||| | |||||||| |||| Sbjct 553 CGAAGTCCCGGTCGTGGATGATGGCCGAGTTCA 521 >seq56688 Length=2816 Score = 280 bits (310), Expect = 1e-70 Identities = 981/1515 (65%), Gaps = 37/1515 (2%) Strand=Plus/Plus Query 22481 ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATC 22540 || ||||| | ||| |||||||| ||| |||| |||| || || |||||||| || ||| Sbjct 802 ACTCGGCGGTTGTACATGTTGGACGTGTACGGCTCGATCGACTCGTTGTTTCCAAGGATC 861 Query 22541 TGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTT 22600 || || || ||||| |||||||| || |||| ||| |||||||| | || |||||||| Sbjct 862 TGGGCCGTGGAAGCCGTCGGCATGGGGGCCACCAGCAGCGAGTTGCGCAGACCGTGCTT- 920 Query 22601 GAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGACGGCG---TCACATTGTC 22656 || | ||| ||||| | ||||| ||||| | | |||| || | || | | Sbjct 921 GACCACGTCCTCCTTGAGTGCAGCCCAGTTCCACATACCCGACGACGGGGTGAC---GCC 977 Query 22657 CCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGG 22716 |||||| ||| | || || | ||| ||| || || ||| | | |||| |||||||| Sbjct 978 CCACATGTCGAACTGGAAGATGCCCTTACTGGCGGGCGAGCCCTGGAACGTCTCGTACGG 1037 Query 22717 ACCATATATCGCGGCAAGTTCGCAGCT-CGCCTCCAACGCGCCGTAATATATAGTCTCGA 22775 || | | ||| | || || | || ||||| || | || || || ||||||| Sbjct 1038 GCCGAGTTCCTTGGCGATCTC-CATCGACGTCTCCATAGCAGCATAGTAGATGGTCTCGA 1096 Query 22776 AGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACG-CATCATCACG 22834 |||| |||||||| | || ||| |||| ||| ||| | || ||| | | Sbjct 1097 AGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACG-CGTAGTTCATGAGGATA 1155 Query 22835 AACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACT 22894 ||||||||||| | ||||| ||||| || ||||| || |||| || || ||| Sbjct 1156 AACGCGTCCGCGAGGCCCTGGACGCCAATGCCGATGGGGCGGTGGCGCATGTTGGACTTG 1215 Query 22895 TTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACA 22954 |||||| || || || | || ||||| |||| ||||| | ||| || Sbjct 1216 CGCGCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACC 1275 Query 22955 ATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAACTTG 23014 | || || | | ||| | |||| || || | || |||||| Sbjct 1276 ACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAAACTCC---TTCCTCCACGAACTTG 1332 Query 23015 TTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACA 23074 | || | || || | ||||| || ||||||||||| |||||||| || | Sbjct 1333 GGCAGCGCCACAGACGCCAAGTTGCACACAGCCACCTCGTCCGGCGACGTGTATTCCATC 1392 Query 23075 ATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGA 23134 | || |||| ||||| | |||||||| | || |||||| || || Sbjct 1393 ACCTCACAGCATAAGTTGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGG 1452 Query 23135 TTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATC 23194 ||| || |||||||| | ||| | ||| |||||||||| ||| | || | || Sbjct 1453 TTGGCCGCGTCCTTGTACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATG 1512 Query 23195 GCTCGCCACATAGTCTGAGCG-TGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTT 23253 || ||||| ||| ||| ||| | | || | | | ||| | | ||||||||| Sbjct 1513 GCGAACCACAGCTGCTGGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGT-CTCGTACTT 1571 Query 23254 TTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGG 23313 || || | || || |||||| | || | || || || || || | | | || Sbjct 1572 TTCATAGAGGGCCTCGAATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGG 1631 Query 23314 ACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTAT 23370 || | ||||||||| | | |||| ||| || | |||| || ||||| || | Sbjct 1632 GCAAAACAGACTCCACTT---GCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCAC 1688 Query 23371 CCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAA 23430 ||| || ||||||||||| || || ||||| | ||| || ||| |||||| | Sbjct 1689 CCAAAGGGCGTAGAACAGGTCACGAGCGCGGTGCAACTCGTTACCGTGGTTCTTACGGAG 1748 Query 23431 ATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGG 23490 ||||| || || ||||| || || ||||| ||||| | ||| | ||| || | |||| Sbjct 1749 GTCCAAGAACTCGAACACATCTGCGTGCCAAGGCTCCAAGTAGATGGCGAAGGAGCCCTT 1808 Query 23491 TCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGG 23550 | ||| |||||||| || ||||| || || |||| ||| |||| | ||||| || Sbjct 1809 ACGCTTGCCTCCGCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGG 1868 Query 23551 CACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT----GCTCGAA 23606 | || || ||||||| |||| | || ||| | | | || || ||||| | Sbjct 1869 GATGATGCCATTGGACGAGCCG--TTCG--TGCCTCGGATGTAGCTGTTCGTGGCTCGGA 1924 Query 23607 CGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCA 23666 |||||| | || || || |||||| || |||| || || || || || || | Sbjct 1925 TGTTGTGCATACTGATGCCAATACCTCCGGCCCATTTAGAGATACAGGCACACTGCTTTA 1984 Query 23667 GAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACA 23726 |||||||| ||||| || || ||| |||| | || | | ||| ||||| |||| Sbjct 1985 ACGTGTCGTAAATGCCTTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCACGACGACA 2044 Query 23727 TTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT 23786 ||| | ||||| |||| || ||||||||| |||| ||||| || | ||| Sbjct 2045 GTTGAGGGCGCGGCGTGCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAA--AAACAT 2102 Query 23787 T--CGACATTAGATTGTACGTGTCGATGGCGGCATCAATG-TCCTCTCCGTGTATACCGA 23843 | |||||| || | |||||| || | ||| || ||||| | |||| ||| || || | Sbjct 2103 TTGCGACATGAGCTCGTACGTCTCCAGGGCAGCCGCAATGTTGCTCT-TGTGGATGCCAA 2161 Query 23844 TGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACA 23903 || |||||||| ||||| | || || | ||| ||| ||| || | ||| | Sbjct 2162 GCGCCACGCGCATAATCATTTGCTGCGGACGCTCCACCACTTTGCCATTTACGCGGAAGA 2221 Query 23904 GATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCA 23963 | || ||| | | |||||||| ||||| ||||| || | ||||| || ||||| | Sbjct 2222 GGTAGCCACGCTCGAGAGTTTTAAACCCAAAGTAGTCGTAATCGAAGTCCCGGTCGTGGA 2281 Query 23964 CTATGGCCGAATTCA 23978 |||||||| |||| Sbjct 2282 TGATGGCCGAGTTCA 2296 >seq42745 Length=3754 Score = 205 bits (226), Expect = 8e-48 Identities = 628/959 (65%), Gaps = 23/959 (2%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| || ||||||||||| |||||||| || | | || |||| | Sbjct 3410 CAAG-TTGCACACAGCCACCTCGTCCGGCGACGTGTATTCCATCACCTCACAGCATAAGT 3352 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 |||| | |||||||| | || |||||| || || ||| || ||||||| Sbjct 3351 TGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 3292 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | | ||| | ||| |||||||||| ||| | || | || || ||||| || Sbjct 3291 ACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCT 3232 Query 23211 GAGCGT-GAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | |||| || | | || | | | ||| | || |||||||||| || | || || Sbjct 3231 GGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTC-TCGTACTTTTCATAGAGGGCCTCG 3173 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 |||||| | || | || || || || || | | | || || | ||||||||| Sbjct 3172 AATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAACAGACTCCAC 3113 Query 23330 ATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAAC 23386 | | |||| ||| || | |||| || ||||| || | ||| || ||||||||| Sbjct 3112 TT---GCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAAC 3056 Query 23387 AGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAAC 23446 || || || ||||| | ||| || ||| |||||| | ||||| || || ||| Sbjct 3055 AGGTCACGAGCGCGGTGCAACTCGTTACCGTGGTTCTTACGGAGGTCCAAGAACTCGAAC 2996 Query 23447 ACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCC 23506 || || || ||||| ||||| | ||| | ||| || | |||| | ||| |||||| Sbjct 2995 ACATCTGCGTGCCAAGGCTCCAAGTAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCC 2936 Query 23507 TGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 || || ||||| || || |||| ||| |||| | ||||| || | || || |||||| Sbjct 2935 TGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGAC 2876 Query 23567 GCGCCGCCTACGCCCGCCACACTCGAACCTTTT----GCTCGAACGTTGTGAACGTGGAA 23622 | |||| | || ||| | | | || || ||||| | |||||| | || Sbjct 2875 GAGCCG--TTCG--TGCCTCGGATGTAGCTGTTCGTGGCTCGGATGTTGTGCATACTGAT 2820 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 || || |||||| || |||| || || || || || || | |||||||| ||||| Sbjct 2819 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACACTGCTTTAACGTGTCGTAAATGCC 2760 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 || || ||| |||| | || | | ||| ||||| |||| ||| | ||||| Sbjct 2759 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCACGACGACAGTTGAGGGCGCGGCGT 2700 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT--CGACATTAGATTG 23800 |||| || ||||||||| |||| ||||| || | |||| |||||| || | | Sbjct 2699 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAA--AAACATTTGCGACATGAGCTCG 2642 Query 23801 TACGTGTCGATGGCGGCATCAATG-TCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859 ||||| || | ||| || ||||| | |||| ||| || || | || |||||||| || Sbjct 2641 TACGTCTCCAGGGCAGCCGCAATGTTGCTCT-TGTGGATGCCAAGCGCCACGCGCATAAT 2583 Query 23860 CATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCAT 23919 ||| | || || | ||| ||| ||| || | ||| || || ||| | | Sbjct 2582 CATTTGCTGCGGACGCTCCACCACTTTGCCATTTACGCGGAAGAGGTAGCCACGCTCGAG 2523 Query 23920 CGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 |||||||| ||||| ||||| || | ||||| || ||||| | |||||||| |||| Sbjct 2522 AGTTTTAAACCCAAAGTAGTCGTAATCGAAGTCCCGGTCGTGGATGATGGCCGAGTTCA 2464 >seq42744 Length=3619 Score = 205 bits (226), Expect = 8e-48 Identities = 628/959 (65%), Gaps = 23/959 (2%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| || ||||||||||| |||||||| || | | || |||| | Sbjct 3275 CAAG-TTGCACACAGCCACCTCGTCCGGCGACGTGTATTCCATCACCTCACAGCATAAGT 3217 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 |||| | |||||||| | || |||||| || || ||| || ||||||| Sbjct 3216 TGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 3157 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | | ||| | ||| |||||||||| ||| | || | || || ||||| || Sbjct 3156 ACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCT 3097 Query 23211 GAGCGT-GAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | |||| || | | || | | | ||| | || |||||||||| || | || || Sbjct 3096 GGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTC-TCGTACTTTTCATAGAGGGCCTCG 3038 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 |||||| | || | || || || || || | | | || || | ||||||||| Sbjct 3037 AATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAACAGACTCCAC 2978 Query 23330 ATTGAGTCATT---TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAAC 23386 | | |||| ||| || | |||| || ||||| || | ||| || ||||||||| Sbjct 2977 TT---GCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAAC 2921 Query 23387 AGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAAC 23446 || || || ||||| | ||| || ||| |||||| | ||||| || || ||| Sbjct 2920 AGGTCACGAGCGCGGTGCAACTCGTTACCGTGGTTCTTACGGAGGTCCAAGAACTCGAAC 2861 Query 23447 ACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCC 23506 || || || ||||| ||||| | ||| | ||| || | |||| | ||| |||||| Sbjct 2860 ACATCTGCGTGCCAAGGCTCCAAGTAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCC 2801 Query 23507 TGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 || || ||||| || || |||| ||| |||| | ||||| || | || || |||||| Sbjct 2800 TGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGAC 2741 Query 23567 GCGCCGCCTACGCCCGCCACACTCGAACCTTTT----GCTCGAACGTTGTGAACGTGGAA 23622 | |||| | || ||| | | | || || ||||| | |||||| | || Sbjct 2740 GAGCCG--TTCG--TGCCTCGGATGTAGCTGTTCGTGGCTCGGATGTTGTGCATACTGAT 2685 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 || || |||||| || |||| || || || || || || | |||||||| ||||| Sbjct 2684 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACACTGCTTTAACGTGTCGTAAATGCC 2625 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 || || ||| |||| | || | | ||| ||||| |||| ||| | ||||| Sbjct 2624 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCACGACGACAGTTGAGGGCGCGGCGT 2565 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT--CGACATTAGATTG 23800 |||| || ||||||||| |||| ||||| || | |||| |||||| || | | Sbjct 2564 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAA--AAACATTTGCGACATGAGCTCG 2507 Query 23801 TACGTGTCGATGGCGGCATCAATG-TCCTCTCCGTGTATACCGATGGCGACGCGCATCAT 23859 ||||| || | ||| || ||||| | |||| ||| || || | || |||||||| || Sbjct 2506 TACGTCTCCAGGGCAGCCGCAATGTTGCTCT-TGTGGATGCCAAGCGCCACGCGCATAAT 2448 Query 23860 CATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCAT 23919 ||| | || || | ||| ||| ||| || | ||| || || ||| | | Sbjct 2447 CATTTGCTGCGGACGCTCCACCACTTTGCCATTTACGCGGAAGAGGTAGCCACGCTCGAG 2388 Query 23920 CGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 |||||||| ||||| ||||| || | ||||| || ||||| | |||||||| |||| Sbjct 2387 AGTTTTAAACCCAAAGTAGTCGTAATCGAAGTCCCGGTCGTGGATGATGGCCGAGTTCA 2329 >seq62410 Length=6674 Score = 161 bits (178), Expect = 9e-35 Identities = 164/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| |||||||| ||||||| || ||||| Sbjct 1856 CATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTC 1797 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | ||||| || | || ||||||||| ||| | ||||||||||| Sbjct 1796 GGACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 1737 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | || ||| | || ||||||| ||||| Sbjct 1736 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTATAA 1677 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| || || ||||| || || ||||| ||| Sbjct 1676 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTT 1643 >seq62796 Length=4303 Score = 152 bits (168), Expect = 5e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| |||||||| ||||||| || ||||| Sbjct 2697 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 2756 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| || | || ||||||||| ||| | ||||| |||||| Sbjct 2757 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 2816 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || ||| | || ||||||| || ||| Sbjct 2817 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAAC 2876 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || ||||| || || || || Sbjct 2877 ATTCAGAAGGAGTCGACGCTGCACCTTGT 2905 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 31238 GACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGC 31297 ||||| || ||||| ||| |||| | ||||| || | || ||||||||| ||| Sbjct 3706 GACGTGGAGCCGTCGGACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAGGGC 3765 Query 31298 GTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACT 31357 | ||||||||||||||||| || || ||||||||||| ||| | || ||| | || Sbjct 3766 ATCCCGCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACG 3825 Query 31358 ATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| || |||||||| || || ||||| || || ||||| ||| Sbjct 3826 CTGAGCGACTACAACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTT 3873 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| |||||||| ||||||| || ||||| Sbjct 3205 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 3264 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| |||| | ||||| || | || ||||||||| ||| | ||||| Sbjct 3265 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAGGGCATCCCGCC 3317 >seq10229 Length=4391 Score = 140 bits (154), Expect = 3e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || ||| ||||| |||||||| ||||| |||| ||||| || ||||| ||||||| | Sbjct 2519 AAGCAACAATGCAGATTTTCGTCAAGACGTTGACGGGCAAGACCATCACGCTCGACGTAG 2578 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | ||||| ||| |||| | || || |||| || ||||||||| ||| | |||| Sbjct 2579 AGCCGTCGGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGC 2638 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 ||||||||||||| || || ||||| ||||| ||| |||| ||| || |||||| Sbjct 2639 CCGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCG 2698 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | || ||||| || || || ||||| || || ||||| || Sbjct 2699 ACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 2738 >seq7695 Length=5764 Score = 140 bits (154), Expect = 3e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || ||| ||||| |||||||| ||||| ||||| || || || ||||| ||||||| | Sbjct 5500 AAGCAACAATGCAGATTTTCGTCAAGACGCTGACGGGTAAGACCATCACGCTCGACGTGG 5559 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | ||||| ||| | || | || || |||| || ||||||||| ||| | |||| Sbjct 5560 AGCCGTCGGACTCGATTGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGC 5619 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 ||||||||||||| || || ||||| ||||| ||| |||| ||| || |||||| Sbjct 5620 CCGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCG 5679 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | || ||||| || || || ||||| || || ||||| || | ||| | ||||| Sbjct 5680 ACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 5734 >seq51638 Length=8654 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || ||||| ||||||| || ||||| Sbjct 8635 CATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 8576 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| || ||||||||| ||| | ||||| ||||| Sbjct 8575 TGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 8516 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| |||| ||| || ||||||| || || Sbjct 8515 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAA 8456 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| || || ||||| || Sbjct 8455 CATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 8423 >seq1442 Length=7791 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| ||||| ||||| || ||||| | ||||| || || Sbjct 5868 AATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCC 5809 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||||| | || | ||||| |||| ||| ||||||||| ||| | ||||| || Sbjct 5808 GTCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGA 5749 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||||||| || ||||| ||||| ||| | || ||| Sbjct 5748 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445363360309440