Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq58340 89.7 5e-13 >seq58340 Length=7784 Score = 89.7 bits (98), Expect = 5e-13 Identities = 183/270 (68%), Gaps = 19/270 (7%) Strand=Plus/Plus Query 99544 CGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAG 99603 || ||||| ||| || ||||||||||||||||| | || |||| || |||| Sbjct 4292 CGGACGGTAAGCACAGTATTGAGCAGCAGCACGCCCTGTCGACTCCAGCAAGACAAGCAG 4351 Query 99604 CCGTGCTGCGGCCGCGGGGTCCCGGGGAAGTTCTTCTGCACGGCCGC---GTAGATGTTC 99660 |||||| || |||| | || | ||| || |||| | | |||||||| Sbjct 4352 CCGTGCGTGGGGCGCGCAATGCCCACGTCGTT------CATGGCCTCCTTGAAGATGTTC 4405 Query 99661 TGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGC 99720 | ||| |||||||| ||| || ||| || ||| |||| ||||||||| |||||| Sbjct 4406 TTGAGACTGGGCGGCGGCGGGACTCCGTGGCGCACCGAGAAGCTCAGGCCGTGAGCCTGC 4465 Query 99721 CCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTCCTCG--GGCGC-- 99776 | | |||||| ||||||||||| || || || ||||||| ||| | ||||| Sbjct 4466 TGCGGCCCGTGGTACGGGTCCTGGCCTAGAATCACCACCTTGAGGTCGGAGAAGGCGCAG 4525 Query 99777 -CGCGTAGCGCGTCCACGCGAAGACGTCCG 99805 | || ||||| |||||| ||||||| Sbjct 4526 TCTCGCAGCGC-----CGCGAACACGTCCG 4550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440500560988320