Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq66235 407 3e-108 seq41581 372 6e-98 seq56688 304 2e-77 seq42745 255 1e-62 seq42744 255 1e-62 seq26165 228 2e-54 seq5951 228 2e-54 >seq66235 Length=2726 Score = 407 bits (450), Expect = 3e-108 Identities = 608/849 (72%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||||||||||||| || ||| |||||| ||||||||| | ||||||| | ||| Sbjct 1061 ATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGAC 1002 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGCC 42428 | | ||||| | ||| | || ||||| ||| ||| |||| || | |||||| Sbjct 1001 CTGAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCC 942 Query 42429 TTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAG 42488 |||||||| ||| ||||||||| || || ||||||||||||| | |||| || || Sbjct 941 TTCTTCGCTGCCAGTGACGGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAA 882 Query 42489 GTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCA 42547 |||||| ||| ||||| |||||||||||||| |||||||| || || |||||| | || Sbjct 881 GTGCAGGTACCG-GAGGCCCGCTGCTTCTACGGTTTCCAGATCGCGATCGAGAACATCCA 823 Query 42548 CTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGC-GTA 42603 ||| |||||||| | ||||||| ||||||||||| |||| | ||| | | Sbjct 822 CTCGGAGGTGTATTCG---CTGCTCATTGACACGTACATCAAGGATGCGACGGAGAAGGA 766 Query 42604 --ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 || |||| | ||||| || ||||| || || | |||||||| ||| ||||||| Sbjct 765 CCACTTGCTGCGC---GCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGC 709 Query 42662 GCTCAACTGGATCGA-----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||||| ||| ||| |||| || || | | ||| || | ||| | || || Sbjct 708 GCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACC---CGG--AGCGCCTGCTGGCGTTC 654 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | ||||| ||||||||||||||||||||| | ||| ||||||||||||||| ||| || Sbjct 653 GCAGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTGAAGAAG 594 Query 42777 AA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 || || ||||| || || | |||||||||||| || |||||| | |||||||| | Sbjct 593 CGCGGCCTC-ATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCAT 535 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGA 42895 ||| | |||||| || |||||| ||| ||| | | || | |||||| || || Sbjct 534 GCACACGGACTTCGCGTGCCTCATGTACTC---CAAGCTGGTGAACAAGCTGCCGGAGAG 478 Query 42896 GCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 || || | | ||| | || || ||| ||||||| | |||||| | | || Sbjct 477 CCGCGTGCACGAGATCGTGCGCGACGCGGTGACGATCGAGCACGAGTTCGTGCGTGACTC 418 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015 ||| || ||| ||| |||||||||| | ||||||||| |||||||| ||| ||| Sbjct 417 GCTCCCTGTGGAGCTGATCGGCATGAATTCGGGGCTCATGTGCCAGTACATCGAGTTCGT 358 Query 43016 CGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG--CCTCTACAACACGCCGTGCCCC 43073 ||||||| ||| |||| | | ||||| | | || |||||||| | ||| Sbjct 357 GGCCGACCGTCTGCTGTACTCGCTGGGTGT--GTCGAAGATCTACAACGTAAAGAACCCG 300 Query 43074 TTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 43133 ||||||| ||||| | |||||| || ||||||||||||||||||||||||||||||| Sbjct 299 TTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTTTTCGAGAAGCGCGTG 240 Query 43134 GCCGACTAC 43142 | ||| ||| Sbjct 239 GGCGAGTAC 231 Score = 105 bits (116), Expect = 1e-17 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || ||| |||||| || Sbjct 1502 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGC 1443 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | | ||||| | ||| | || || || Sbjct 1442 CGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGCGAACCTGACGGACAATGAGCG 1383 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| ||| |||| | | |||||||||||||| ||| |||||||| || || ||||| Sbjct 1382 GTTCTTCATCAAGCATGTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAA 1323 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAG 42494 |||||||| | |||| || || |||||| Sbjct 1322 CCTGGCCATGAACTTCAGCAATGAAGTGCAG 1292 >seq41581 Length=4797 Score = 372 bits (412), Expect = 6e-98 Identities = 1095/1675 (65%), Gaps = 62/1675 (4%) Strand=Plus/Minus Query 243775 CAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAG 243834 || ||||||||||||||||||||| || | |||||||| || |||||| | ||| || Sbjct 2346 CATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGAG 2287 Query 243835 CTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTG 243894 ||| | || | |||||| | | || |||||| ||||| ||||| Sbjct 2286 CTTGCTGATGGTC------GGGTCGGCGATGTG------GATGTTGAGCGACTGACTCTG 2239 Query 243895 GTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATA 243954 | | | | | | || || || | || | | | ||||||| ||||| | Sbjct 2238 GCAAATGTACGCACCGCGGTCGGCCGACAGGTCCAGCACCGCCTTCTGCTTGATCTCCCA 2179 Query 243955 CGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCC 244014 | |||||||||| | ||||| ||| || |||| | | | || |||||||| ||||| Sbjct 2178 CACCGTCTTGTACTTCTCCTTGACGTGGTCCGGGATCGCCTTGACATTCTGCACAGAGCC 2119 Query 244015 CTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTC---CAG 244071 ||| | | || |||| |||||| || |||| | ||| | |||| ||| Sbjct 2118 ACTGTCGTTCAAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGA---GCTCGATCAG 2062 Query 244072 CGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTA 244131 | ||| | ||||| | |||| || | | |||||||| | |||||| ||||| | ||| Sbjct 2061 CTCCTTCATCAGGTACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTA 2002 Query 244132 GAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGC 244191 | |||| || ||||||||| ||| |||| || || ||||| |||||| || Sbjct 2001 CATGTTGGACGTGTACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGC 1942 Query 244192 AGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTC 244250 ||||||||||| | ||||||||| ||| | || |||||| | ||| || || Sbjct 1941 CGTCGGCATGGGGGCCACCAGCAGCGAGTTGCGCAGTCCGTGCTT---GATCACGTCCTC 1885 Query 244251 --TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTC 244308 ||||| ||||| |||||| ||||| | || | | || |||||||||||| Sbjct 1884 CTTGAGCGTAGCCCAGTTCCACATACCCGA-----CGACGGGGT-GACGCCCCACATGTC 1831 Query 244309 AAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCG 244368 ||||| | | ||||||||| |||| ||||| | | ||| ||| || ||| Sbjct 1830 GAACTGGAAGATGCCCTTGCTGGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTC 1771 Query 244369 CTGGGCCAGCTTACAGCT-CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCT 244427 || ||| | || || | | || | || || |||||||||||||||||||| ||| Sbjct 1770 CTTGGCGATCTC-CATCGACGTCTCCATAGCAGCATAGTAGATGGTCTCGAAGATGTTCT 1712 Query 244428 TGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGG 244487 |||| | || |||||||| ||| ||| | | | ||| | || || |||| | Sbjct 1711 TGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACGCGTAGTTCATGAGGATAAACGCGTCCG 1652 Query 244488 CCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA---GCGCATGGCTT 244544 | || ||||| ||||| ||||||||||| | ||| ||| ||||||| |||| || | Sbjct 1651 CGAGGCCCTGGACGCCAATGCCGATGGGGCGGTGGCGCATGTTGGACTTGCGC---GCCT 1595 Query 244545 CGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGA 244604 || ||||||||| ||||| ||||||| |||||||| | ||||||||||| || | Sbjct 1594 CGATCACGGGGTAGTAGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTGG 1535 Query 244605 CGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC- 244663 || || || | ||| ||| | | | |||| ||||| Sbjct 1534 TCACCTCATACAACTTCTGGTAGTTGAAAAC-------TCCT------------TCCTCC 1494 Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTG 244723 || |||| | || || || |||| |||||| || |||||||| |||| ||| Sbjct 1493 ACGAACTTGGGCAGCGCCACAGACGCCAAGTTGCACACAGCCACCTCGTCCGGCGACGTG 1434 Query 244724 TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTG 244783 || | | | ||| ||| | ||| ||| | ||| ||||| |||| ||| || || Sbjct 1433 TATTCCATCACCTCACAGCATAAGTTGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTC 1374 Query 244784 GACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCG 244843 |||||| |||| ||||||||||| | ||| |||||| | || ||||||| ||||||| Sbjct 1373 GACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGCACTCCCGTCTCGATCTGGGCG 1314 Query 244844 ACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCC 244903 | | | | | ||| || | | || |||| |||| |||| || ||||| | | Sbjct 1313 TCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTC 1254 Query 244904 TCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC 244963 ||||| || ||||||||||| ||| ||||||| ||| | || || ||| | Sbjct 1253 TCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCC 1194 Query 244964 GACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCG 245023 ||||| | |||||||||| ||| | | | ||||||| |||||| || || Sbjct 1193 TCGTTAGGGCAAAACAGACTCCACTTGCCATTGGCTTCCACCCTCTTCATGAACAGATCA 1134 Query 245024 GGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTC 245083 || | ||| ||||| | ||| ||||| | | | ||| || || |||||| Sbjct 1133 GGCACCCAAAGGGCGTAGAACAGGTCACGAGCGCGGTGCAACTCGTTACCGTGGTTCTTA 1074 Query 245084 CTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCG 245143 | || ||||| || || || || || ||||||| ||||||| ||||| |||| || | Sbjct 1073 CGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAGGCTCCAAGTAGATGGCGAAGGAG 1014 Query 245144 CCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGG 245203 || |||||| || ||||||||||| || | || |||| || | ||||| Sbjct 1013 CCCTTACGCTTGCCTCCGCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGC 954 Query 245204 GTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG 245263 | || | ||||| || || |||||| ||||| ||||||| | | || | | | Sbjct 953 ATGGGGATGATGCCATTGGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTCGTGGCTCGG 894 Query 245264 AGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTG 245323 | |||| || ||||| | || ||||| || ||||| ||| || ||| Sbjct 893 ATGTTGTGCATACTGATGCCAATACCTCCGGCCCATTTAGAGATACAGGCACACTGCTTT 834 Query 245324 ATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT-CATGTTGAGCAGAAAGCAGGAGGA 245382 | ||||| ||||| || || || || ||| |||| | || ||||| || || Sbjct 833 AACGTGTCGTAAATGCCTTCAATTGAGT-CGTCTTGCATGGCCAATAGGAAGCACGACGA 775 Query 245383 CAGCTG-GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 ||| || |||| || | ||| | ||| || || || ||| |||| || || || Sbjct 774 CAGTTGAGGGCGCGGCG-TGCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAA 721 >seq56688 Length=2816 Score = 304 bits (336), Expect = 2e-77 Identities = 873/1332 (66%), Gaps = 42/1332 (3%) Strand=Plus/Plus Query 244114 CAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAG 244173 |||||| ||||| | ||| | |||| || ||||||||| ||| |||| || || Sbjct 798 CAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGCTCGATCGACTCGTTGTTTCCAAG 857 Query 244174 TATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTG 244233 ||||| |||||| || ||||||||||| | ||||||||| ||| | || ||||| Sbjct 858 GATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCACCAGCAGCGAGTTGCGCAGACCGTG 917 Query 244234 CCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291 | | | || || |||| | ||||| |||||| ||||| | || | Sbjct 918 CTTGACCA--CGTCCTCCTTGAGTGCAGCCCAGTTCCACATACCCGA-----CGACGGGG 970 Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351 | || |||||||||||| ||||| | | ||||| ||| |||| ||||| | | ||| Sbjct 971 T-GACGCCCCACATGTCGAACTGGAAGATGCCCTTACTGGCGGGCGAGCCCTGGAACGTC 1029 Query 244352 GGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGGCGGCGTAGTAGAT 244410 ||| || ||| || ||| | || || | | || | || || |||||||| Sbjct 1030 TCGTACGGGCCGAGTTCCTTGGCGATCTC-CATCGACGTCTCCATAGCAGCATAGTAGAT 1088 Query 244411 GGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCAT 244470 |||||||||||| ||||||| | || |||||||| ||| ||| | | | ||| Sbjct 1089 GGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACGCGTAGTTCAT 1148 Query 244471 CATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTT 244530 | || || |||| || || ||||| ||||| ||||||||||| | ||| ||| |||| Sbjct 1149 GAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATGCCGATGGGGCGGTGGCGCATGTT 1208 Query 244531 GGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTT 244587 ||| |||| || ||| ||||||||| ||||| ||||||| |||||||| | ||| Sbjct 1209 GGACTTGCGC---GCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTGTTTAAGTT 1265 Query 244588 GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTC 244647 |||||||| || | || || || | ||| ||| | | | |||| Sbjct 1266 GCGGGTGACCACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAAAC-------TCCT- 1317 Query 244648 GGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCA 244706 ||||| || |||| | || || || |||| |||||| || |||| Sbjct 1318 -----------TCCTCCACGAACTTGGGCAGCGCCACAGACGCCAAGTTGCACACAGCCA 1366 Query 244707 CCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGC 244766 |||| |||| ||||| | | | ||| ||| | ||| ||| | ||| |||| Sbjct 1367 CCTCGTCCGGCGACGTGTATTCCATCACCTCACAGCATAAGTTGCTGGAGCGGATCGTGC 1426 Query 244767 CCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCC 244826 | |||| ||| || || |||||| |||| ||||||||||| | ||| |||||| | | Sbjct 1427 CGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGCACTC 1486 Query 244827 CGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGC 244886 | ||||||| ||||||| | | | | | ||| || | | || |||| |||| ||| Sbjct 1487 CCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTCTTGC 1546 Query 244887 GAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCT 244946 | || ||||| | |||||| || ||||||||||| ||| ||||||| || Sbjct 1547 GGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAGCACT 1606 Query 244947 CGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCC 245006 | | || || ||| | ||||| | |||||||||| ||| | | | |||| Sbjct 1607 CATAGAGTCCAGGGGCCTCGTTAGGGCAAAACAGACTCCACTTGCCATTGGCTTCCACCC 1666 Query 245007 TCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGT 245066 ||| |||||| || || || | ||| ||||| | ||| ||||| | | | ||| | Sbjct 1667 TCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCACGAGCGCGGTGCAACT 1726 Query 245067 CCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCA 245126 | || |||||| | || ||||| || || || || || ||||||| ||||||| Sbjct 1727 CGTTACCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAGGCTCCA 1786 Query 245127 TGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG 245186 ||||| |||| || ||| |||||| || ||||||||||| || | || Sbjct 1787 AGTAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCACGTACCGCGCGGTGT 1846 Query 245187 CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGT 245246 |||| || | ||||| | || | ||||| || || |||||| ||||| ||||| Sbjct 1847 CGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACGAGCCGTTCGTGCCTCGGATGT 1906 Query 245247 AGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGA 245306 || | | || | | || |||| || ||||| | || ||||| || |||| Sbjct 1907 AGCTGTTCGTGGCTCGGATGTTGTGCATACTGATGCCAATACCTCCGGCCCATTTAGAGA 1966 Query 245307 TGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT-CATGTTG 245365 | ||| || ||| | ||||| ||||| || || || || ||| |||| Sbjct 1967 TACAGGCACACTGCTTTAACGTGTCGTAAATGCCTTCAATTGAGT-CGTCTTGCATGGCC 2025 Query 245366 AGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCT 245424 | || ||||| || ||||| || |||| || | ||| | ||| || || || ||| | Sbjct 2026 AATAGGAAGCACGACGACAGTTGAGGGCGCGGCG-TGCCGGCGTTAAAAAGTGTCGGGGT 2084 Query 245425 GGCGTGGGTAAA 245436 ||| || || || Sbjct 2085 GGCATGCGTGAA 2096 >seq42745 Length=3754 Score = 255 bits (282), Expect = 1e-62 Identities = 687/1046 (66%), Gaps = 30/1046 (3%) Strand=Plus/Minus Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG 244456 || || |||||||||||||||||||| ||||||| | || |||||||| ||| | Sbjct 3685 GCAGCATAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCG 3626 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || | | | ||| | || || |||| || || ||||| ||||| ||||||||||| Sbjct 3625 AACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATGCCGATGGGG 3566 Query 244517 CTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 | ||| ||| ||||||| |||| || ||| ||||||||| ||||| ||||||| Sbjct 3565 CGGTGGCGCATGTTGGACTTGCGC---GCCTCGATCACGGGGTAGTAGTTGACGTCGATG 3509 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 |||||||| | ||||||||||| || | || || || | ||| ||| | | Sbjct 3508 ACCTTGTTTAAGTTGCGGGTGACCACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAA 3449 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | |||| ||||| || |||| | || || || |||| Sbjct 3448 AC-------TCCT------------TCCTCCACGAACTTGGGCAGCGCCACAGACGCCAA 3408 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 |||||| || |||||||| |||| ||||| | | | ||| ||| | ||| || Sbjct 3407 GTTGCACACAGCCACCTCGTCCGGCGACGTGTATTCCATCACCTCACAGCATAAGTTGCT 3348 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 | | ||| ||||| |||| ||| || || |||||| |||| ||||||||||| | Sbjct 3347 GGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAA 3288 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||| |||||| | || ||||||| ||||||| | | | | | ||| || | | || Sbjct 3287 CATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGC 3228 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 |||| |||| |||| || ||||| | |||||| || ||||||||||| || Sbjct 3227 GTTGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTC 3168 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCC 244992 | ||||||| ||| | || || ||| | ||||| | |||||||||| ||| Sbjct 3167 GTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAACAGACTCCACTTGCC 3108 Query 244993 GCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCT 245052 | | | ||||||| |||||| || || || | ||| ||||| | ||| ||||| | Sbjct 3107 ATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCACG 3048 Query 245053 GGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGAC 245112 | | ||| || || |||||| | || ||||| || || || || || | Sbjct 3047 AGCGCGGTGCAACTCGTTACCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGC 2988 Query 245113 GTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 |||||| ||||||| ||||| |||| || ||| |||||| || ||||||||||| Sbjct 2987 GTGCCAAGGCTCCAAGTAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCAC 2928 Query 245173 CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232 || | || |||| || | ||||| | || | ||||| || || |||||| Sbjct 2927 GTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACGAGCCGTT 2868 Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCC 245292 ||||| ||||||| | | || | | || |||| || ||||| | || || Sbjct 2867 CGTGCCTCGGATGTAGCTGTTCGTGGCTCGGATGTTGTGCATACTGATGCCAATACCTCC 2808 Query 245293 GGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTC 245352 ||| || ||||| ||| || ||| | ||||| ||||| || || || Sbjct 2807 GGCCCATTTAGAGATACAGGCACACTGCTTTAACGTGTCGTAAATGCCTTCAATTGAGT- 2749 Query 245353 CGACTT-CATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTG 245410 || ||| |||| | || ||||| || ||||| || |||| || | ||| | ||| Sbjct 2748 CGTCTTGCATGGCCAATAGGAAGCACGACGACAGTTGAGGGCGCGGCG-TGCCGGCGTTA 2690 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAA 245436 || || || ||| |||| || || || Sbjct 2689 AAAAGTGTCGGGGTGGCATGCGTGAA 2664 >seq42744 Length=3619 Score = 255 bits (282), Expect = 1e-62 Identities = 687/1046 (66%), Gaps = 30/1046 (3%) Strand=Plus/Minus Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG 244456 || || |||||||||||||||||||| ||||||| | || |||||||| ||| | Sbjct 3550 GCAGCATAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCG 3491 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || | | | ||| | || || |||| || || ||||| ||||| ||||||||||| Sbjct 3490 AACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATGCCGATGGGG 3431 Query 244517 CTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 | ||| ||| ||||||| |||| || ||| ||||||||| ||||| ||||||| Sbjct 3430 CGGTGGCGCATGTTGGACTTGCGC---GCCTCGATCACGGGGTAGTAGTTGACGTCGATG 3374 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 |||||||| | ||||||||||| || | || || || | ||| ||| | | Sbjct 3373 ACCTTGTTTAAGTTGCGGGTGACCACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAA 3314 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | |||| ||||| || |||| | || || || |||| Sbjct 3313 AC-------TCCT------------TCCTCCACGAACTTGGGCAGCGCCACAGACGCCAA 3273 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 |||||| || |||||||| |||| ||||| | | | ||| ||| | ||| || Sbjct 3272 GTTGCACACAGCCACCTCGTCCGGCGACGTGTATTCCATCACCTCACAGCATAAGTTGCT 3213 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 | | ||| ||||| |||| ||| || || |||||| |||| ||||||||||| | Sbjct 3212 GGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAA 3153 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||| |||||| | || ||||||| ||||||| | | | | | ||| || | | || Sbjct 3152 CATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGC 3093 Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932 |||| |||| |||| || ||||| | |||||| || ||||||||||| || Sbjct 3092 GTTGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTC 3033 Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCC 244992 | ||||||| ||| | || || ||| | ||||| | |||||||||| ||| Sbjct 3032 GTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAAAACAGACTCCACTTGCC 2973 Query 244993 GCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCT 245052 | | | ||||||| |||||| || || || | ||| ||||| | ||| ||||| | Sbjct 2972 ATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCACG 2913 Query 245053 GGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGAC 245112 | | ||| || || |||||| | || ||||| || || || || || | Sbjct 2912 AGCGCGGTGCAACTCGTTACCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGC 2853 Query 245113 GTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC 245172 |||||| ||||||| ||||| |||| || ||| |||||| || ||||||||||| Sbjct 2852 GTGCCAAGGCTCCAAGTAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCAC 2793 Query 245173 CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232 || | || |||| || | ||||| | || | ||||| || || |||||| Sbjct 2792 GTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACGAGCCGTT 2733 Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCC 245292 ||||| ||||||| | | || | | || |||| || ||||| | || || Sbjct 2732 CGTGCCTCGGATGTAGCTGTTCGTGGCTCGGATGTTGTGCATACTGATGCCAATACCTCC 2673 Query 245293 GGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTC 245352 ||| || ||||| ||| || ||| | ||||| ||||| || || || Sbjct 2672 GGCCCATTTAGAGATACAGGCACACTGCTTTAACGTGTCGTAAATGCCTTCAATTGAGT- 2614 Query 245353 CGACTT-CATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTG 245410 || ||| |||| | || ||||| || ||||| || |||| || | ||| | ||| Sbjct 2613 CGTCTTGCATGGCCAATAGGAAGCACGACGACAGTTGAGGGCGCGGCG-TGCCGGCGTTA 2555 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAA 245436 || || || ||| |||| || || || Sbjct 2554 AAAAGTGTCGGGGTGGCATGCGTGAA 2529 >seq26165 Length=1295 Score = 228 bits (252), Expect = 2e-54 Identities = 322/447 (72%), Gaps = 9/447 (2%) Strand=Plus/Plus Query 42699 GAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCC 42758 ||| | ||| | || || | ||||| ||||||||||||||||||||| | ||| |||| Sbjct 23 GAGCGCCTGCTGGCGTTCGCAGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCC 82 Query 42759 ATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||||||||| ||| || || || ||||| || || | |||||||||||| || || Sbjct 83 ATCTTCTGGCTGAAGAAGCGCGGCCTC-ATGCCTGGCCTGAGCTTCTCGAACGAGCTGAT 141 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877 |||| | |||||||| |||| | |||||| || |||||| ||| ||| | | || Sbjct 142 CAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTC---CAAGCTGGT 198 Query 42878 GCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAA 42937 | |||||| || || || || | | ||| | || || ||| ||||||| | Sbjct 199 GAACAAGCTGCCGGAGAGCCGCGTGCACGAGATCGTGCGCGACGCGGTGACGATCGAGCA 258 Query 42938 GGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTG 42997 |||||| | | ||||| || ||| ||| |||||||||| | |||||||| Sbjct 259 CGAGTTCGTGCGTGACTCGCTCCCTGTGGAGCTGATCGGCATGAATTCGGGGCTCATGTG 318 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG--CCTC 43055 | |||||||| ||| ||| ||||||| ||| |||| | | ||||| | | || || Sbjct 319 CCAGTACATCGAGTTCGTGGCCGACCGTCTGCTGTACTCGCTGGGTGT--GTCGAAGATC 376 Query 43056 TACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAAC 43115 |||||| | ||| ||||||| ||||| | |||||| || |||||||||||||| Sbjct 377 TACAACGTAAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAAC 436 Query 43116 TTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||||||||||||||||| | ||| ||| Sbjct 437 TTTTTCGAGAAGCGCGTGGGCGAGTAC 463 >seq5951 Length=1254 Score = 228 bits (252), Expect = 2e-54 Identities = 322/447 (72%), Gaps = 9/447 (2%) Strand=Plus/Minus Query 42699 GAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCC 42758 ||| | ||| | || || | ||||| ||||||||||||||||||||| | ||| |||| Sbjct 1232 GAGCGCCTGCTGGCGTTCGCAGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCC 1173 Query 42759 ATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||||||||| ||| || || || ||||| || || | |||||||||||| || || Sbjct 1172 ATCTTCTGGCTGAAGAAGCGCGGCCTC-ATGCCTGGCCTGAGCTTCTCGAACGAGCTGAT 1114 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877 |||| | |||||||| |||| | |||||| || |||||| ||| ||| | | || Sbjct 1113 CAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTC---CAAGCTGGT 1057 Query 42878 GCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAA 42937 | |||||| || || || || | | ||| | || || ||| ||||||| | Sbjct 1056 GAACAAGCTGCCGGAGAGCCGCGTGCACGAGATCGTGCGCGACGCGGTGACGATCGAGCA 997 Query 42938 GGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTG 42997 |||||| | | ||||| || ||| ||| |||||||||| | |||||||| Sbjct 996 CGAGTTCGTGCGTGACTCGCTCCCTGTGGAGCTGATCGGCATGAATTCGGGGCTCATGTG 937 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG--CCTC 43055 | |||||||| ||| ||| ||||||| ||| |||| | | ||||| | | || || Sbjct 936 CCAGTACATCGAGTTCGTGGCCGACCGTCTGCTGTACTCGCTGGGTGT--GTCGAAGATC 879 Query 43056 TACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAAC 43115 |||||| | ||| ||||||| ||||| | |||||| || |||||||||||||| Sbjct 878 TACAACGTAAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAAC 819 Query 43116 TTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||||||||||||||||| | ||| ||| Sbjct 818 TTTTTCGAGAAGCGCGTGGGCGAGTAC 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943485375712320