Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq56688 93.3 4e-14 seq41581 89.7 5e-13 >seq56688 Length=2816 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 124178 GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAAT 124237 ||||||| |||| ||||||||| ||||||| |||||||||||| |||| || || || Sbjct 918 GCACGGTCTGCGCAACTCGCTGCTGGTGGCCCCCATGCCGACGGCTTCCACGGCCCAGAT 859 Query 124238 TTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTT 124297 | ||||||||||| || ||||||||| ||| ||| ||||| || |||||| | Sbjct 858 CCTTGGAAACAACGAGTCGATCGAGCCGTACACGTCCAACATGTACAACCGCCGAGTGCT 799 Query 124298 AGCCGG 124303 || || Sbjct 798 GGCTGG 793 >seq41581 Length=4797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 124178 GCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAAT 124237 |||||| |||| ||||||||| ||||||| |||||||||||| |||| || || || Sbjct 1899 GCACGGACTGCGCAACTCGCTGCTGGTGGCCCCCATGCCGACGGCTTCCACGGCCCAGAT 1958 Query 124238 TTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTT 124297 | ||||||||||| || ||||||||| ||| ||| ||||| || |||||| | Sbjct 1959 CCTTGGAAACAACGAGTCTATCGAGCCGTACACGTCCAACATGTACAACCGCCGAGTGCT 2018 Query 124298 AGCCGGCGATTT 124309 || || || || Sbjct 2019 GGCTGGAGAGTT 2030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451594521306720