Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cambivora_20[genbank_20GCA_5F000443045.1_202013-08- 07] 72,332 sequences; 230,616,123 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq62796 167 5e-36 seq62410 167 5e-36 seq7695 163 6e-35 seq10229 154 3e-32 seq51638 152 1e-31 seq1442 140 7e-28 seq16526 129 1e-24 seq14701 129 1e-24 seq38157 114 3e-20 seq36052 109 1e-18 seq20999 109 1e-18 seq8913 109 1e-18 seq637 109 1e-18 seq17601 107 4e-18 seq13047 107 4e-18 seq58494 100 6e-16 seq3475 100 6e-16 seq56688 95.1 3e-14 seq63661 86.0 1e-11 seq41581 86.0 1e-11 >seq62796 Length=4303 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || | || || || | ||| || || || ||||||||||| Sbjct 2923 CCACCGCGCAGACGCAACACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 2864 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || || || ||||||| ||| || |||||| ||| Sbjct 2863 AGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGG 2804 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||||||| || ||| | ||||| | |||||| | || || Sbjct 2803 ATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 2744 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 2743 TCGAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 2697 Score = 118 bits (130), Expect = 2e-21 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| ||||| || | ||| || || || ||||||||||| Sbjct 3887 CCACCACGAAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 3828 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || || || ||||||| || || ||||| ||| Sbjct 3827 AGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 3768 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 || ||||||||||| ||||||||| || ||| | ||||| | |||||| Sbjct 3767 ATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGA 3718 Score = 105 bits (116), Expect = 1e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048 ||| || ||||||||||| ||||||||| || ||| | ||||| | |||||| | || Sbjct 3315 CGGGATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTC 3256 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 3255 CACGTCGAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 3205 >seq62410 Length=6674 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| ||||| || | ||| || || || ||||| ||||| Sbjct 1629 CCACCACGAAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTATAGTCGCTC 1688 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || || || ||||||| || || ||||| ||| Sbjct 1689 AGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 1748 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||||||| || ||| | ||||| | |||||| | || || Sbjct 1749 ATGCCCTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACG 1808 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| ||||| ||||| |||||||| Sbjct 1809 TCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 1855 >seq7695 Length=5764 Score = 163 bits (180), Expect = 6e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || ||||| || | ||| || || |||||||||||||| Sbjct 5734 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 5675 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||| | || || ||||| ||| Sbjct 5674 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 5615 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| ||||| ||| | || || | |||||| | || || Sbjct 5614 ATGCCCTCCTTGTCCTGAATCTTCTGCTTC-ACGTTGTCAATCGAGTCCGACGGCTCCAC 5556 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| ||||| ||||||||||||| ||||| ||||| ||||||||| Sbjct 5555 GTCGAGCGTGATGGTCTTACCCGTCAGCGTCTTGACGAAAATCTGCATT 5507 >seq10229 Length=4391 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||| || | ||| || || |||||||||||||| ||||||||||| ||| Sbjct 2738 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 2679 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || || ||||| ||||| | || || ||||| ||| || ||||||||||| Sbjct 2678 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2619 Query 283008 TGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || ||||| ||| || ||| | ||||| | |||||| | || || ||||| ||||| || Sbjct 2618 TGAATCTTCTGC-TTCACGTTGTCGATCGAGTCCGACGGCTCTACGTCGAGCGTGATGGT 2560 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| |||||||| ||||| ||||| ||||||||| Sbjct 2559 CTTGCCCGTCAACGTCTTGACGAAAATCTGCATT 2526 >seq51638 Length=8654 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||| || | ||| || || |||||||||||||| ||||||||||| ||| Sbjct 8423 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 8482 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || || ||||| ||||||| || || |||||| ||| || ||||||||||| Sbjct 8483 TCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 8542 Query 283008 TGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 || ||||| ||| || ||| | ||||| | ||| || | || || ||||| ||||| || Sbjct 8543 TGAATCTTCTGC-TTCACGTTGTCGATCGAGTCAGACGGCTCCACGTCGAGCGTGATGGT 8601 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||||| ||||| ||||| |||||||| Sbjct 8602 CTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 8634 >seq1442 Length=7791 Score = 140 bits (154), Expect = 7e-28 Identities = 146/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||||||||||| ||||| || || || ||||| |||||| Sbjct 5677 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 5736 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || |||||| ||| || ||||||||||| ||||| || ||| || || | || Sbjct 5737 AGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATTTTCTGC-TTGACATTGTC 5795 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||| || | || || || || ||||| ||||| ||||||| ||||| || || Sbjct 5796 AATGCTGTCGGACGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAA 5855 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 5856 GATCTGCAT 5864 >seq16526 Length=573 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 316987 AGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGA 317046 |||| ||||| || | |||| ||||| ||||| | ||||| || || | ||| Sbjct 186 AGGTTGTGCTCGACGAACACAGTCTTCAGCTCGTCCTTGCTGGGGAATCCCTCAAGCTGG 245 Query 317047 CCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCA 317106 ||||| |||| || | |||||| |||||||||||| ||| ||||| ||||| ||||| Sbjct 246 CCGTTGGCAATGGCGCGCATCAGCGTCGACTTGCCACAACCGTTGGGACCGCACAGACCG 305 Query 317107 TACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATAT 317166 || || | || ||| || || ||||| ||||||||| |||||| ||||||| || Sbjct 306 TAACGGTGGCCACGCTTGAGGCGAAGACGGGCGTTGTTCAGCAGAATCATACCACCGTAA 365 Query 317167 GCCAGAGAGAACTCACAATCACACAGGTC 317195 || || ||||||||||| | || ||||| Sbjct 366 GCGAGCGAGAACTCACAGTTGCAAAGGTC 394 >seq14701 Length=527 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 316987 AGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGA 317046 |||| |||||||| | |||| ||||| ||||| | ||||| || || | ||| Sbjct 269 AGGTTGTGCTCAACGAACACAGTCTTCAGCTCGTCCTTGCTGGGGAAGCCCTCAAGCTGG 210 Query 317047 CCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCA 317106 ||||| |||| || | |||||| |||||||| ||| ||| ||||| ||||| ||||| Sbjct 209 CCGTTGGCAATGGCGCGCATCAGCGTCGACTTACCACAACCGTTGGGACCGCACAGACCG 150 Query 317107 TACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATAT 317166 || || | || ||| || || ||||| ||||||||| |||||| ||||||| || Sbjct 149 TAACGGTGGCCACGCTTGAGGCGAAGACGGGCGTTGTTCAGCAGAATCATACCACCGTAA 90 Query 317167 GCCAGAGAGAACTCACAATCACACAGGTC 317195 || || ||||||||||| | || ||||| Sbjct 89 GCGAGCGAGAACTCACAGTTGCAAAGGTC 61 >seq38157 Length=6640 Score = 114 bits (126), Expect = 3e-20 Identities = 294/443 (66%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 273620 AGACCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGAC 273679 ||||||||| || || ||||| | ||||| | || | ||||||| || || || Sbjct 1545 AGACCAACCCGTACCGATACCCTCCGCGCCATTAATGAGCAGCATCGGGATGATAGGCAC 1486 Query 273680 ATAATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATC 273739 ||||| ||||||||| |||||||||| | || ||||| |||||||| Sbjct 1485 GTAATACACGGGCTCAACGGGGAAGCCATCGTCGTCAGCATAGCGCAACAGCGCATCATC 1426 Query 273740 CGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACT 273799 ||| ||| || ||||| || | || |||||| ||||| | | ||| Sbjct 1425 GTCTTCAGGGAATACAAGGCGCGTGTGCTTTTGAAGCAGCGTGAAGATGTAACGAGGACT 1366 Query 273800 CGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCT-CGGGCAGTAGCCAGT 273858 || |||||||| || ||||| | | ||||||||| || ||| | | ||| Sbjct 1365 AGCGGCATCCTTGCCTCCCTGCAGTCGAGTACCAAACTGGCCGGACGGATACAA--CAGC 1308 Query 273859 TTATG-TTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGAT 273917 | | |||||| || ||| ||||||| ||||| ||||| || ||| || | || Sbjct 1307 GGAAGGTTGTTGGAGCCCACGAAATCCTGCGCCATGTTCACAATCGTCGAGTGTAACGAA 1248 Query 273918 ACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTC 273977 ||||||||||||| ||||| ||||||| | |||||| | ||| || |||||| Sbjct 1247 GCCTCGCCGTGGTGGTAGGCCGTGTGTTCACTGCAGTAACCAGCAAGCTGTGCCACCTTC 1188 Query 273978 ACATCGCTCGTCAAGTTTCGCTT---GAATGCGGAATACAACACCTTCCGCTGCGAGGGC 274034 || |||||||| | || ||||| | | ||| || | |||||| ||||| ||| Sbjct 1187 ACCTCGCTCGTTAGCTTGCGCTTCAGGCAGGCGAAA---AGCACCTTGCGCTGTGAGATT 1131 Query 274035 TTGAACCCATCAACGACCGATGG 274057 |||| ||||| || || || || Sbjct 1130 TTGAGTCCATCGACCACTGACGG 1108 >seq36052 Length=4305 Score = 109 bits (120), Expect = 1e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| ||||| || | |||||| || || |||||||||||||| | Sbjct 3061 ACCACCGCGCAGACGAAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 3002 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 ||| |||||||| ||||| || || || ||||| ||||||| || || |||||| Sbjct 3001 AAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCA 2947 >seq20999 Length=2285 Score = 109 bits (120), Expect = 1e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| ||||| || | |||||| || || |||||||||||||| | Sbjct 279 ACCACCGCGCAGACGAAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 220 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 ||| |||||||| ||||| || || || ||||| ||||||| || || |||||| Sbjct 219 AAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCA 165 >seq8913 Length=3353 Score = 109 bits (120), Expect = 1e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| ||||| || | |||||| || || |||||||||||||| | Sbjct 2007 ACCACCGCGCAGACGAAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 2066 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 ||| |||||||| ||||| || || || ||||| ||||||| || || |||||| Sbjct 2067 AAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCA 2121 >seq637 Length=2185 Score = 109 bits (120), Expect = 1e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| ||||| || | |||||| || || |||||||||||||| | Sbjct 833 ACCACCGCGCAGACGAAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 892 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 ||| |||||||| ||||| || || || ||||| ||||||| || || |||||| Sbjct 893 AAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCA 947 >seq17601 Length=1722 Score = 107 bits (118), Expect = 4e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGA 316221 || ||||| |||||||| ||||||| ||||||||||| |||| |||| ||| || Sbjct 790 TCCTTGTCCTCACCGGACTGGAAACGCCACTGGATGTACTGGTTGGCCGTCTCGTCGAGG 731 Query 316222 TGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 316281 || ||| |||||||||||||||||||| |||||||| || | |||||| || ||| Sbjct 730 TGCGACTCAATGTGGTGGAAAGCGTGCTGAGCCACGTAGGCGAAACGCATGGAAGGGTGC 671 Query 316282 TTCCAAACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTT 316341 ||||| || ||| | || | |||| || || || |||| || || || || Sbjct 670 TTCCACACCTGTCCGCTCGTCGGCTCCACCTCACCCGTCAGCATCTTGATCAGCGTCGAC 611 Query 316342 TTTCCCGCGCCGTT 316355 || || || ||||| Sbjct 610 TTACCGGCACCGTT 597 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||||| ||||| ||||| ||| | ||| | ||| || | ||||| || Sbjct 1310 GTGAGTAATCATGACCACACCACCGTTGAAGTCCTTGATAGCCGAAGCAAGAGCACCAAG 1251 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 |||||||| | |||| |||||||||||||| || | || ||| || | |||| Sbjct 1250 CGAGTCGCGGTCAAGGTAGTTCGTCGGCTCATCAAGCACAAGGATGTGCGGGTTCAGCCA 1191 Query 315771 TAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGA 315830 | |||||| | | |||| ||| | || || ||||| ||||| ||||| ||||| || Sbjct 1190 CATAGCGGCAGCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 1131 Query 315831 ATGAGT 315836 || || Sbjct 1130 GTGGGT 1125 >seq13047 Length=3013 Score = 107 bits (118), Expect = 4e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGA 316221 || ||||| |||||||| ||||||| ||||||||||| |||| |||| ||| || Sbjct 933 TCCTTGTCCTCACCGGACTGGAAACGCCACTGGATGTACTGGTTGGCCGTCTCGTCGAGG 992 Query 316222 TGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 316281 || ||| |||||||||||||||||||| |||||||| || | |||||| || ||| Sbjct 993 TGCGACTCAATGTGGTGGAAAGCGTGCTGAGCCACGTAGGCGAAACGCATGGAAGGGTGC 1052 Query 316282 TTCCAAACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTT 316341 ||||| || ||| | || | |||| || || || |||| || || || || Sbjct 1053 TTCCACACCTGTCCGCTCGTCGGCTCCACCTCACCCGTCAGCATCTTGATCAGCGTCGAC 1112 Query 316342 TTTCCCGCGCCGTT 316355 || || || ||||| Sbjct 1113 TTACCGGCACCGTT 1126 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||||| ||||| ||||| ||| | ||| | ||| || | ||||| || Sbjct 413 GTGAGTAATCATGACCACACCACCGTTGAAGTCCTTGATAGCCGAAGCAAGAGCACCAAG 472 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 |||||||| | |||| |||||||||||||| || | || ||| || | |||| Sbjct 473 CGAGTCGCGGTCAAGGTAGTTCGTCGGCTCATCAAGCACAAGGATGTGCGGGTTCAGCCA 532 Query 315771 TAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGA 315830 | |||||| | | |||| ||| | || || ||||| ||||| ||||| ||||| || Sbjct 533 CATAGCGGCAGCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 592 Query 315831 ATGAGT 315836 || || Sbjct 593 GTGGGT 598 >seq58494 Length=3866 Score = 100 bits (110), Expect = 6e-16 Identities = 291/443 (66%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 273620 AGACCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGAC 273679 ||||||||| || || ||||| | ||||| | || | ||||||| || || || Sbjct 909 AGACCAACCCGTACCGATACCCTCCGCGCCATTAATGAGCAGCATCGGGATGATAGGCAC 850 Query 273680 ATAATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATC 273739 ||||| ||||||||| |||||||||| | || ||| | |||||||| Sbjct 849 GTAATACACGGGCTCAACGGGGAAGCCATCGTCGTCAGCATAGCGCAAGAGCGCATCATC 790 Query 273740 CGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACT 273799 ||| ||| || ||||| || | || |||||| ||||| | | || Sbjct 789 ATCTTCAGGGAATACAAGACGCGTGTGCTTTTGAAGCAGCGTGAAGATGTAACGAGGGCT 730 Query 273800 CGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCT-CGGGCAGTAGCCAGT 273858 || |||||||| || || || | | ||||||||| || ||| | | ||| Sbjct 729 AGCGGCATCCTTGCCTCCCTGTAGTCGAGTACCAAACTGGCCGGACGGATACAA--CAGC 672 Query 273859 TTATG-TTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGAT 273917 | | |||||| || ||| ||||||| ||||| ||||| || ||| || | || Sbjct 671 GGAAGGTTGTTGGAGCCCACGAAATCCTGCGCCATGTTCACAATCGTCGAGTGTAACGAA 612 Query 273918 ACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTC 273977 ||||||||||||| ||||| ||||||| | |||||| | ||| || |||||| Sbjct 611 GCCTCGCCGTGGTGGTAGGCCGTGTGTTCACTGCAGTAACCAGCAAGCTGTGCCACCTTC 552 Query 273978 ACATCGCTCGTCAAGTTTCGCTT---GAATGCGGAATACAACACCTTCCGCTGCGAGGGC 274034 || |||||||| | || ||||| | | ||| || | |||||| ||||| ||| Sbjct 551 ACCTCGCTCGTTAGCTTGCGCTTCAGGCAGGCGAAA---AGCACCTTGCGCTGTGAGATT 495 Query 274035 TTGAACCCATCAACGACCGATGG 274057 |||| ||||| || || || || Sbjct 494 TTGAGTCCATCGACCACTGACGG 472 >seq3475 Length=7232 Score = 100 bits (110), Expect = 6e-16 Identities = 290/444 (65%), Gaps = 12/444 (3%) Strand=Plus/Plus Query 273620 AGACCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGAC 273679 ||||||||| || || ||||| | ||||| | || | ||||||| || || || Sbjct 806 AGACCAACCCGTACCGATACCCTCCGCGCCATTAATGAGCAGCATCGGGATGATAGGCAC 865 Query 273680 ATAATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATC 273739 ||||| |||| |||| |||||||||| | || ||| | |||||||| Sbjct 866 GTAATACACGGGTTCAACGGGGAAGCCATCGTCGTCAGCATAGCGCAAGAGCGCATCATC 925 Query 273740 CGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACT 273799 ||| ||| || ||||| || | || |||||| ||||| | | || Sbjct 926 ATCTTCAGGGAATACAAGACGCGTGTGCTTTTGAAGCAGCGTGAAGATGTAACGAGGGCT 985 Query 273800 CGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGG---CAGTAGCCA 273856 || || ||||| || || || | | |||||||||||| || ||||||| Sbjct 986 AGCGGCATCTTTGCCTCCCTGTAGTCGAGTACCAAACTGACCGGACGGATACAGTAGCGG 1045 Query 273857 GTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGA 273916 | ||||||| || ||| | ||||| ||||| ||||| || ||| || | || Sbjct 1046 A---AGGTTGTTGGAGCCCACGAAGTCCTGTGCCATGTTCACAATCGTCGAGTGTAACGA 1102 Query 273917 TACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTT 273976 ||||||||||||| ||||| ||||||| | |||||| | ||| || ||||| Sbjct 1103 AGCCTCGCCGTGGTGGTAGGCCGTGTGTTCACTGCAGTAACCAGCAAGCTGTGCCACCTT 1162 Query 273977 CACATCGCTCGTCAAGTTTCGCTT---GAATGCGGAATACAACACCTTCCGCTGCGAGGG 274033 ||| |||||||| | || ||||| | | ||| || | |||||| ||||| ||| Sbjct 1163 CACCTCGCTCGTTAGCTTGCGCTTCAGGCAGGCGAAA---AGCACCTTGCGCTGTGAGAT 1219 Query 274034 CTTGAACCCATCAACGACCGATGG 274057 |||| ||||| || || || || Sbjct 1220 TTTGAGTCCATCGACCACTGACGG 1243 >seq56688 Length=2816 Score = 95.1 bits (104), Expect = 3e-14 Identities = 266/401 (66%), Gaps = 13/401 (3%) Strand=Plus/Minus Query 299554 AGGTCCATCGACGTCATGGCATACCCCATCAAAGAAGCGCAGACATCGAACATGCTGCGC 299613 ||||| |||||||||| |||||| | | || |||| | || ||||||| | | Sbjct 1255 AGGTC-ATCGACGTCAACTACTACCCCGTGATCGAGGCGCGCAAGTCCAACATGCGCCAC 1197 Query 299614 CGCCCCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAACTGAAGCTCCCA 299673 |||||||||||| | || || || || || ||| | ||| || |||| | | Sbjct 1196 CGCCCCATCGGCATTGGCGTCCAGGGCCTCGCGGACGCGTTTATCCTCATGAACTACGCG 1137 Query 299674 TTTGACTCTCCGGAGGCCAGGGATCTTAACCGGGAAATCTTCGAGCATATCTACTACGCT 299733 || || | ||||| |||| || ||| | | ||||||||| |||||||| ||| Sbjct 1136 TTCGAGAGCGAGAAGGCCCGGGAGCTCAACAAGAACATCTTCGAGACCATCTACTATGCT 1077 Query 299734 GCCGTTGAAGCGTCGGTAGAACTCGC---GGAAATCCACGGGCCTCACCCCACCTTCGAA 299790 || | || ||||| | || |||| |||| || || || || || ||| | Sbjct 1076 GCTATGGAGACGTCGATGGAGATCGCCAAGGAACTC---GGCCCGTACGAGACGTTCCAG 1020 Query 299791 GGGTCTCCTGCAAGTAAGGGCATCCTCCAATACCACTTGTGGGATGTTACCCC--CAAAA 299848 || || || || |||||||||||| |||| | | || |||||| || ||||| | Sbjct 1019 GGCTCGCCCGCCAGTAAGGGCATCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCGTCG 960 Query 299849 GCGATCTCG-ACTGGCGAGGACTCGAGGA--ACG-CGTAAAGAAGGGGGTGCGGAACTCT 299904 | || | | ||||| | |||| |||| ||| || ||| | || |||| ||||| Sbjct 959 GGTATGTGGAACTGGGCTGCACTCAAGGAGGACGTGGTCAAGCACGGTCTGCGCAACTCG 900 Query 299905 CTACTGACCGCCCTCATGCCCACCGCAAGCACCGCCCAGAT 299945 || ||| |||| |||||| || || ||| |||||||| Sbjct 899 CTGCTGGTGGCCCCCATGCCGACGGCTTCCACGGCCCAGAT 859 >seq63661 Length=7350 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| ||||||||||| ||||| || | || || || |||||| Sbjct 4885 TTCTGGATGTTGTAGTCGATCAGCGTGCGGCCGTCCTCCAGCAGCTTGCCAGCGAAGATC 4944 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || ||| || |||||| ||||||||| || ||| || ||| || ||| | || Sbjct 4945 AGACGCTGCTGGCCAGGCGGAATGCCCTCCTTGAATTCGATTTTCTGC-TTCACGTTGTC 5003 Query 283031 GATAGTGTC 283039 ||| | ||| Sbjct 5004 GATCGAGTC 5012 >seq41581 Length=4797 Score = 86.0 bits (94), Expect = 1e-11 Identities = 266/402 (66%), Gaps = 15/402 (4%) Strand=Plus/Plus Query 299554 AGGTCCATCGACGTCATGGCATACCCCATCAAAGAAGCGCAGACATCGAACATGCTGCGC 299613 ||||| |||||||||| |||||| | | || |||| | || ||||||| | | Sbjct 1562 AGGTC-ATCGACGTCAACTACTACCCCGTGATCGAGGCGCGCAAGTCCAACATGCGCCAC 1620 Query 299614 CGCCCCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAACTGAAGCTCCCA 299673 |||||||||||| | || || || || || ||| | ||| || |||| | | Sbjct 1621 CGCCCCATCGGCATTGGCGTCCAGGGCCTCGCGGACGCGTTTATCCTCATGAACTACGCG 1680 Query 299674 TTTGACTCTCCGGAGGCCAGGGATCTTAACCGGGAAATCTTCGAGCATATCTACTACGCT 299733 || || | ||||| |||| || ||| | | ||||||||| |||||||| ||| Sbjct 1681 TTCGAGAGCGAGAAGGCCCGGGAGCTCAACAAGAACATCTTCGAGACCATCTACTATGCT 1740 Query 299734 GCCGTTGAAGCGTCGGTAGAACTCGC---GGAAATCCACGGGCCTCACCCCACCTTCGAA 299790 || | || ||||| | || |||| |||| | ||| || || || ||| | Sbjct 1741 GCTATGGAGACGTCGATGGAGATCGCCAAGGAA---CTCGGCCCGTACGAGACGTTCCAG 1797 Query 299791 GGGTCTCCTGCAAGTAAGGGCATCCTCCAATACCACTTGTGGGATGTTACCCC--CAAAA 299848 || || || || || ||||||||| |||| | | || |||||| || ||||| | Sbjct 1798 GGCTCGCCCGCCAGCAAGGGCATCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCGTCG 1857 Query 299849 GCGATCTCG-ACT-GGCGAGGACTCGAGGA--ACGCG-TAAAGAAGGGGGTGCGGAACTC 299903 | || | | ||| ||| | | ||| |||| ||| | | ||| | || |||| ||||| Sbjct 1858 GGTATGTGGAACTGGGCTACG-CTCAAGGAGGACGTGATCAAGCACGGACTGCGCAACTC 1916 Query 299904 TCTACTGACCGCCCTCATGCCCACCGCAAGCACCGCCCAGAT 299945 || ||| |||| |||||| || || ||| |||||||| Sbjct 1917 GCTGCTGGTGGCCCCCATGCCGACGGCTTCCACGGCCCAGAT 1958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045769130521128