Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4 170 2e-37 >seq4 Length=136950 Score = 170 bits (188), Expect = 2e-37 Identities = 198/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 5500 CACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTC 5559 |||||| ||| ||||| ||||| ||||| | |||| || || | ||||||||| Sbjct 14486 CACGCCGGTGCTGCCGAAGCCGCCGGCGCCGCGCGCCGTGTCCTCGATCTCCGCCACCTC 14545 Query 5560 TTCCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTT 5619 | ||| || ||| || | |||| ||| |||||||| | ||||| || || Sbjct 14546 CTGCACCTCCGGGTACTCGATCTTCTCGAGGATGAGCTGCGCCACGCGGTCCCCGCGCTG 14605 Query 5620 TACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTC 5679 || ||| || | | || ||||||||| | |||||||||||||||||||||||| Sbjct 14606 CACGGGGAAGTCCTCGGCCGCGTGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTC 14665 Query 5680 GGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGG 5739 |||||| ||||||||||||||| ||||||||| | ||||| ||||||||| ||||| || Sbjct 14666 GGCGTCGATCACGCCCGCGCCCGTGTCGATGAACTTCTTGAGCGCCAGGCCAGAGCGCGG 14725 Query 5740 AGCCACGCGGCCGTAGCACCCATCGGG 5766 |||||||| ||||||| || |||| Sbjct 14726 CGCCACGCGCGCGTAGCAGCCGGCGGG 14752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430024121079224