Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10-
14] 5,777 sequences; 53,691,444 total letters
Query= NC_006151.1
Length=143461
Score E
Sequences producing significant alignments: (Bits) Value
seq1240 107 2e-18
>seq1240
Length=9922
Score = 107 bits (118), Expect = 2e-18
Identities = 195/282 (69%), Gaps = 5/282 (2%)
Strand=Plus/Plus
Query 94135 GACGACGGCGCGCACGAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCG 94194
|| ||||||| | || | || |||||||| || ||| ||| || | |||||
Sbjct 2242 GATGACGGCGTCCGTGAACTGCTCCCAGCCGCGCTTCTTGTGAGAGTTCGGCTCTCCGCG 2301
Query 94195 CCGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCA 94254
|| ||||| ||| ||||| ||||||||||| || |||| |||| ||||||
Sbjct 2302 GCGGACGGTAAGCACGGTGTTGAGCAGCAGCACGCCCTGGCGGCTCCAGCAGGACAGGCA 2361
Query 94255 GCCGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCG-GACCGCCGCGAAGATGTTGG 94313
|||||| | || |||| | | | |||||| | | || || |||||||||
Sbjct 2362 GCCGTGCGACGG-GCGGTCGATGCCC---ACGTCGTTCATGGCCTCCTTGAAGATGTTCT 2417
Query 94314 CCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGC 94373
||||| || || ||| || ||| | || || |||| ||| |||||||||||
Sbjct 2418 TGAGGCTGGGCGGCGGCGGGACGCCGTGGCGCACCGAGAAGCTCAGTCCGTGGGCCTGCT 2477
Query 94374 CCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGA 94415
||||||||| |||||||||||||| | ||| ||||||||||
Sbjct 2478 GCGGCCCGTGATACGGGTCCTGGCCCAGGATCACCACCTTGA 2519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458914058275320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |