Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4292 210 4e-49 seq467 210 4e-49 seq54 185 2e-41 seq45 127 4e-24 seq476 120 6e-22 seq333 120 6e-22 seq706 105 1e-17 seq1022 95.1 2e-14 >seq4292 Length=2137 Score = 210 bits (232), Expect = 4e-49 Identities = 616/935 (66%), Gaps = 23/935 (2%) Strand=Plus/Minus Query 9893 TTAGAAGTCTGCGTCAATTGCAAACACGTTGTCGTCGGCATTCATG---ACGCCCGCCTT 9949 ||||||||| ||||| | | ||||| | || ||||| | | ||||| ||||| Sbjct 946 TTAGAAGTCAGCGTCCAAGGTGAACACCTGCTCCTCGGCCGCGACGCCGACGCCGGCCTT 887 Query 9950 CTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTC 10009 |||||| || || |||||||||||||| |||||||| ||| || || | || Sbjct 886 GGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGAGAGATCATGTC 827 Query 10010 CATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAAT 10069 ||| |||| || ||||||| || | ||| || ||| || | | | Sbjct 826 CATCCAGTCGAACGGGTTCTTCACGTTGTAGATCTTTGGCACACCCAGCGAGTACAGCAG 767 Query 10070 GCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCG 10129 ||||| |||||||||||||||||||||| ||| || ||||||||||||| |||| || Sbjct 766 ACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCCGAGTTCATGCCGATCA-GCT 708 Query 10130 GCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGC 10188 || |||| | ||||| | ||| || | ||| | | ||||| || || || | Sbjct 707 CCACAGGGAGCGAGTCGCGCACGAACTCGTGCTCGATCACCACCGCGTCGCGCACAAT-C 649 Query 10189 TCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAA 10246 || | | || || || |||||||||| | ||||| || |||| ||| | || Sbjct 648 TCGTGCACGCGGCTCTCCGG-CAGCTTGTTCACCAGCTTGGAGTACATGAGGCACGCGAA 590 Query 10247 CTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCAT 10306 | | ||| | |||||||| |||||||| | |||||| || || | ||| || ||||| Sbjct 589 GTCCGTGTGCATACCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCAT 530 Query 10307 GAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTC 10366 ||| || || || |||||||| |||| |||||| || || ||||| | || ||||| Sbjct 529 GAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCCGAGAAGAAAATGCCCTC 470 Query 10367 CACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCGAAAAGTATTTC-- 10424 |||| | | || | || ||||| | | | || | |||| | | | Sbjct 469 CACGGCGGCGAACGCCAGCAGACGCTCCGGGTACGACGACACACGCGGGTCGCACCACTT 410 Query 10425 GAG-GCCCA---CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAG-A 10479 ||| ||||| |||| |||||| |||| |||||||||||||| || || || | Sbjct 409 GAGCGCCCAGTGCGCTTTCTTCTT---CACGCACGGGATCGTCTCGATGGCG-CGCAGCA 354 Query 10480 GCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGC 10539 | | || ||| |||||| || | ||||| |||||| ||||| |||| Sbjct 353 GGTGGTCCTTCTCCACGGCGTCCTTGATGTACGTATCAATGAGCAGCGAGTACACCTCGG 294 Query 10540 TGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGA 10599 ||||| | |||| || |||| | ||||||| || || ||| || | Sbjct 293 CGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGGACCTCGGGCACCTGCA 234 Query 10600 CTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGA 10659 |||| | | ||||| || ||||||||| |||| || || ||||| | || |||| Sbjct 233 CTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACAATACCGTCGCTCGCAGCGAAGA 174 Query 10660 AGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTA 10719 | | || | ||||||||||||| ||||| | || |||| || | |||||| Sbjct 173 ACGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGC---CCAGTCCT 117 Query 10720 CCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGT 10779 | || || || | | |||||| | |||||||| | ||| | |||||||||| Sbjct 116 TGAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCCTTCTTGT 57 Query 10780 ACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 ||||||| | | |||| | | | |||| |||||| Sbjct 56 ACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 22 >seq467 Length=26285 Score = 210 bits (232), Expect = 4e-49 Identities = 784/1211 (65%), Gaps = 66/1211 (5%) Strand=Plus/Plus Query 224465 ACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAGCGACTCGCGGTCAAGG 224524 ||||| ||| ||| || | ||| || | ||| || |||||||| |||||||||||| Sbjct 12632 ACACCACCGTTGAACTCCTTGATGGCCGAAGCAAGGGCACCAAGCGAGTCGCGGTCAAGG 12691 Query 224525 AAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGCTGCACCAACC 224584 ||||||||||||| || || | | | ||| ||| | |||||| || ||| | | | Sbjct 12692 TAGTTCGTCGGCTCGTCAAGCACCAGGATGTGCGGGTTCAGCCACATAGCAGCAGCCAGC 12751 Query 224585 ACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGAGTGAGTCGTGAATTCG 224644 || | ||||||||||||||| ||||| || || || || |||||||| || ||| ||| Sbjct 12752 ACGACCTTCACCTTCTGACCACCAGACAGACCACGCATGCGCGAGTGGGTACCGAACTCG 12811 Query 224645 GGGTCAAGACCAATCTTGGCCATATGGTCCTCGATGTTCTTGGCAGTCAG-GGGCTTTCC 224703 | | | || || | | ||| || | || | | |||| || | |||| || Sbjct 12812 GCGCCCAGGCCGAAGCAGTCCAGGTGCTTCTGCACGGCGATGGCCGTAGGCGGGCGGGCC 12871 Query 224704 AAGGAGACCGTTGGCAGCAGCATCCTTGGCGTCAATGTCG----GCAAGCAGCTTCTGGA 224759 | || |||||| || | | | |||| | || ||| | ||||| | Sbjct 12872 T-GCAG---GTTGGCGCGTGCGGCTTCGCGGTCATCGGCGATCTGCA-GAAGCTTGTCCC 12926 Query 224760 AACCGAATTCCTCGAGCTTCTCGCGGACCATCCAGGAAGCAGACTCGTCG---------T 224810 | || | | ||| |||||| || || ||||| | ||||||| | Sbjct 12927 AGCCCCACTTCTCACACTTCTCACGCGGCACCCAGG---CGTTCTCGTCGACGGGGCACT 12983 Query 224811 TCTTCCAGAACACCTCATACTCGTAGGTGCGCTTGAACTTGCGGCGGCCACCAATACGGT 224870 ||| ||| | ||| |||||| || | |||||| ||||||||| |||| | Sbjct 12984 TCTCCCACTTGAGCTCGTACTCGAAGCTCTTCTTGAATTTGCGGCGGGACACAATCTCCT 13043 Query 224871 CCAGG---CGCTTCTTGACGCC---GTCCACTACCTTGATTTCGTACATCTTCTC----G 224920 ||||| ||||||| | | | || ||| ||| | | || || |||||| | Sbjct 13044 CCAGGACGCGCTTCTCGCCCTCCCAGTTCACCGGCTTCTTGTAGTGCAGCTTCTCCTCAG 13103 Query 224921 GTGTCCACGGCGCTCCGCTCTGCGCGATCAACCGACTCCAGGTCCTGGCCTGAGGCATAC 224980 | ||| || | | ||| | | || | |||| ||||| || || | Sbjct 13104 GGGTCA---GCTTACGGGTCTCCTTGGCCAGAAG-CTCCTTGTCCTCACCGGACTGGAAG 13159 Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||| Sbjct 13160 CGCCACTGGATGTACTGGTTGGCCGTCTCGTCAAGGTGAGACTCAATGTGGTGGAAAGCG 13219 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| ||| | ||||| Sbjct 13220 TGCTGAGCCACGTAGGCGAAACGCATGGCAGGGTGCTTCCACACCTGGCCGCTCGTCGGC 13279 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| ||||| | ||| || ||||| |||||||||| | Sbjct 13280 TCCACCTCACCCGTCAGCATCTTGATCAGCGTCGACTTACCGGCACCGTTGGGGCCAAGC 13339 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC--CTGCGAGTTCACGTTGCT-GAAGATCTCAGG 225216 ||| | || ||| |||| || || | ||| | |||| | || | || || Sbjct 13340 ACGGCGATACGGCTCGACAGAGCGCACGTCACCGAAATGTTGTTGATCGACGGCTTCGGG 13399 Query 225217 G---CCAGTT--TGGTA--AGCA-AAGGCCACGCCACGCAGCTTCATGATGGCACGGTCC 225268 | || | | | ||| |||| || || ||| ||||||| || Sbjct 13400 GCACCCGGGTACTTGTACGAGCAGTTGGTCA---GACG------AATGATGGGCTTACCC 13450 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTT---GGTCACCGCG 225325 ||| | ||| | ||||||| || ||||| |||||| |||| | || ||| Sbjct 13451 TTGTTCTTGATATCAGCCAGGAAACCAGGCTCCGGGAACGTGAACTTCACGTTCTCCG-- 13508 Query 225326 TCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385 || ||| |||||||| | |||||||| || ||||||| || ||||| Sbjct 13509 -ACTCCAGCTCGTAGTAGGCCTTGGCCTCGGGCTTCTGCTCCACGAATTTGGAAAGGTTA 13567 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG 225445 || || || | |||||| || |||| || || | ||| | ||||| | Sbjct 13568 CCCTTGTAGATCTTCAGCTTGCGG---GTCTCATAGTGGATAATGTTGGTACACACGTTG 13624 Query 225446 TCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGG 225505 || ||||||||||||||||| ||||| |||||||| | || ||| || || | ||| Sbjct 13625 TCGAGGAAGCCAGAGTCGTGAGACACCATGATGGAGGTGACCGTCGGCACGCTGGTCAGG 13684 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | | ||||| || ||||| |||| |||| |||||| || || || || |||||| Sbjct 13685 TAGTTCTCAAGCCAGGCGACGTTCTTGACATCCAAGTGGTTCGTCGGCTCATCAAGAAGC 13744 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 || |||||||| | | || ||||| |||| || || ||||| ||||| || || Sbjct 13745 AGAATGTCAGCCTTCAGCAGCATGGCACGCGACAGCTCGAGTTTCATCTTCCAACCACCC 13804 Query 225626 GACAGGGAGCC 225636 ||||||||||| Sbjct 13805 GACAGGGAGCC 13815 Score = 118 bits (130), Expect = 2e-21 Identities = 222/324 (69%), Gaps = 2/324 (1%) Strand=Plus/Plus Query 226336 GGCGTCCGCGGGATCCTCCACGAGGCGCGACATGTTGTTGATAATCACACAGGTCTTGCG 226395 ||| || ||||| || |||| || ||||||||| || || || || || || Sbjct 14602 GGCCTCAGCGGGGTCGTCCATCAGCTTGCACATGTTGTCAATGATGACGGCGGCCTGACG 14661 Query 226396 CTTCACCACGGTGGTGCGCTCCGCGAGACCGCGGCAGATGAGGGGCACGAGCACGGCAAG 226455 |||||| |||| ||| ||| || ||| | || | || ||| | | | |||||| Sbjct 14662 CTTCACGGCGGTCTTGCCCTCAGCCAGAGCACGCTTCAGCAGCGGCTCCATGATGGCAAG 14721 Query 226456 GGTCCGGGCATCCACGGTCTGGACAAAAGTGGTCGCGGACAGCTTGTGGACGCACTCGGG 226515 || |||| ||||| |||| ||| || ||||||| | ||||||||| |||||| || Sbjct 14722 GGCGGGGGCCTCCACAGTCTTGACGAACGTGGTCGATGCCAGCTTGTGCGTGCACTCAGG 14781 Query 226516 GACCTGGCTCGTGTCGGAAATAGA-CTCGATGAGGTGGGGCACAAAGGGGTCAATGTCCT 226574 |||| | | || || | | ||| | ||| ||| | ||||| || || ||| Sbjct 14782 CACCTCCGTGGGGTTGGCCAGGCAGCTC-ACCAGGGCGGGGATGAAGGGCTCGATATCCA 14840 Query 226575 TGTTGCCAATGGACTTGCAGCACATGACCAGAGTGTCCTTGGCAGCATCCTTCACAGCCT 226634 ||||||| | | |||||| | || || |||||||||||| || ||||||| ||| Sbjct 14841 TGTTGCCCACGACGTTGCAGACCTTGGTCATAGTGTCCTTGGCGGCGACCTTCACCTCCT 14900 Query 226635 TGCGGATGTCAACCATGCAGTCCG 226658 ||||| |||| ||||||||||| Sbjct 14901 TGCGGGTGTCCCACATGCAGTCCG 14924 Score = 105 bits (116), Expect = 1e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| |||||||| || ||||| || || | || || ||| || || Sbjct 13993 GGGGAAGCCCTCGAGCTGGCCGTTGGCAATGGCGCGCATGAGCGTCGACTTACCACAACC 14052 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 |||||| ||| || |||||| | | || ||||||| | || || | | |||||| Sbjct 14053 GTTGGGGCCGCACAGACCGTAACGGTGGCCACGCTTGAGGCGAAGACGGGCGTTGTTCAG 14112 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 || ||| | ||||| |||||||| ||||||||||| | ||||||||| Sbjct 14113 CAGAATCATACCACCGTAGGCAAGCGAGAACTCGCAGTTGCACAGGTC 14160 >seq54 Length=75248 Score = 185 bits (204), Expect = 2e-41 Identities = 379/554 (68%), Gaps = 12/554 (2%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| || |||||||| || || |||||||| ||||| || || Sbjct 22685 CTGAAGCATGCGCCACATGCACTCCACATAGTCGCGAGCGTGGCCCCAGTCGCGTTTCGC 22744 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGT--GCAAGACCG 268363 || | ||| || | || ||||| |||| | |||| ||| ||| | ||| ||| | Sbjct 22745 ATCGAGGTTGCCAACAAAGAGGCACTTCTCCATGCC-AGC---ACGAATACGCACGACAG 22800 Query 268364 C--GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGA 268421 | |||| || || || || ||||| || || || | ||||| || |||||||| | Sbjct 22801 CACGAGTAATCTTGCGAGTGACGAAGGTTGGTCCTCGCCGCGGGCTTTCATGGTTGAACA 22860 Query 268422 GGATGCCGTTGCACG-CGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTAT 268480 || || || |||| |||||||||| || ||||| || | |||||| || ||||| | Sbjct 22861 AAATTCCATT-CACGGCGAACATGCCGTAGGCCTCGCGATGGTTCACCACGCTCCAGAAG 22919 Query 268481 GCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGA 268540 || ||| ||| || || | || || || || || ||||| || ||| | | ||| Sbjct 22920 GCGAACTGCTTCGCGACACCATAGGGTGATCGCGGGTGGAACGGAGTCTTCTCGTCTTGC 22979 Query 268541 GGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTT 268600 || | || | |||||||| | || || ||||| |||||||||||| || | Sbjct 22980 GGCGTGGCTTGCACTTTGCCGTACAGTTCACTCGTCGACGCTTGGTAGAACCGCGTCGAG 23039 Query 268601 TTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACG 268660 | ||| || || || | || | | ||||| ||||| | || | ||||| || Sbjct 23040 TGTTCCAGTCCACACGTGCGCAAACACGTGAGCAGTCGAAGTGCGCCGACCCCATCGACA 23099 Query 268661 TCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTA 268720 ||||| || ||||| | || || || || |||| ||||||| | || || ||||| Sbjct 23100 TCCGCCGTGTACTCGGCCAGTTCAAAAGAGACCTTGACATGGGACATCGCCCCGAGGTTG 23159 Query 268721 TAAACCTCATCCGGTTTGACCTGCTGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAG 268779 || || ||||||||| || || ||| |||| ||| | || | | ||||||||| Sbjct 23160 TACACTTCATCCGGTCGCACACGCGCCACAATCTGGCAC-AAATTGGACGCGTCGGTGAG 23218 Query 268780 GTCTCCGTAGTGCA 268793 |||||||||||||| Sbjct 23219 GTCTCCGTAGTGCA 23232 >seq45 Length=78880 Score = 127 bits (140), Expect = 4e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| ||||| || ||||| || | |||| ||| || || ||||| || |||||||| | Sbjct 57293 TTTAGTTTCCGCCACGAAGACGAAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGT 57234 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| || || | || || || | |||||| || ||||| || || | || |||| Sbjct 57233 AGTCGCTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGT 57174 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || || ||||| ||||||||||| || || ||| ||| ||||| | ||| | | Sbjct 57173 CAGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGACG 57114 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 57113 GCTCCACGTCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 57059 Score = 113 bits (124), Expect = 8e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || |||||||| || ||| Sbjct 57057 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 56998 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 56997 AACGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGG 56938 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || ||| ||| ||||| | ||| | | || || Sbjct 56937 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCACG 56878 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 56877 TCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 56831 >seq476 Length=26050 Score = 120 bits (132), Expect = 6e-22 Identities = 481/752 (64%), Gaps = 13/752 (2%) Strand=Plus/Minus Query 31496 GAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTT--A 31553 || ||| ||||| || |||||||| || | || || ||||| |||||||||| | Sbjct 4135 GATGAAGGCGTCCGCGAGGCCCTGGACGCCGATGCCGATGGGGCGGTGGCGCATGTTGGA 4076 Query 31554 CTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTG 31613 || | |||||||| | | |||| | ||||||| ||| ||||| |||||| | Sbjct 4075 CTTGCG--CGCCTCGGCCACGGGGTAGTAGTTGACGTCGATGACCTTGTTGAGGTTGCGG 4018 Query 31614 GCCAGAATCTTCACGTGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGTAG 31673 | || | ||| | || | || | || ||||| | | |||| | ||| | Sbjct 4017 GTCACCACCTTGGTGACCTCGTAGAGTTTCTGGTAGTCGAACACGCCGTCGTCCACGAAC 3958 Query 31674 TTCTGGAGGACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATTCG 31733 || | || | | | | | | ||||| ||| ||||| | || ||||| || Sbjct 3957 TTGGGCAGCGCCACGGAGGCCAGGTTGCACACGGCCACCTCGTCGGGGGACGTGTACTCC 3898 Query 31734 ACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTCTTC 31793 | | |||| || || |||||| |||||||||| || ||| || ||| Sbjct 3897 ATCACCTCGCAGCACAGGTTGCTGGAGCGGATGGTGCCGAGGTTCTGCTGGTTGGACTTG 3838 Query 31794 ACGTTCACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATGATC 31853 ||| | |||||||| ||||| | | |||| ||||||||||||||||| | | Sbjct 3837 CGGTTGGCCGCGTCCTTGTAGAGCATGAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGG 3778 Query 31854 ATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGGACTCGTAG 31913 || || ||| | | |||| |||| | || || || |||||| |||||| Sbjct 3777 ATGGCGAACCACAGCTGCTGCGCGTTGATGGTCTTGCGGGCGCGGCCCTCGCGCTCGTAC 3718 Query 31914 CGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGACACTCCTTG 31973 || ||| ||| |||| | || || ||| || ||||| ||| ||| Sbjct 3717 TTGTCGTAGAGGCTCTCAAACTCGTCCCCCCAGCACTCGTAGAGCCCGGGGGCCTCGTTG 3658 Query 31974 GGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGC 32033 ||| ||| | ||| | | | |||||| || |||||||||||||||||| || | Sbjct 3657 GGGCAGAACAAACTCCACTTGCCGTTGGCCTCCACGCGCTTCATGAACAGGTCGGGCACC 3598 Query 32034 CACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGC 32093 |||| |||||| ||||| | | ||| || || ||| | || ||||| || || Sbjct 3597 CACAGCGCGTAGAACAGGTCGCGGGCACGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGG 3538 Query 32094 AGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTG 32153 |||||| || | | ||||| ||| |||||||||||| | |||||| |||||| Sbjct 3537 TCCAGGAACTCGAACACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGCTGCCCTTG 3478 Query 32154 CG---GCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGT---ACACCTTCAGCATG 32207 || || || ||||||| |||| | | | |||||||| |||| ||||||| Sbjct 3477 CGCTTGCCGCCGCCCTGGTCCACGTA--CCG-GGCCGTGTCGTTGAACACGCGCAGCATG 3421 Query 32208 GGTACGATGCCATCAGACTCGCCATTGGTCCC 32239 || | |||||| | || ||| ||||| || Sbjct 3420 GGGATGATGCCGTTGGAGGAGCCGTTGGTGCC 3389 >seq333 Length=63294 Score = 120 bits (132), Expect = 6e-22 Identities = 256/377 (68%), Gaps = 18/377 (5%) Strand=Plus/Plus Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161 || ||||| || |||||||| || || ||| | || ||||||||||||||||| |||||| Sbjct 15339 ATCGACACCATCATGCACTTCGCGGCCCAGTCGCACGTGGACAACTCGTTCGGCAACTCG 15398 Query 173162 CTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTC 173221 | | || | || || |||| || || || ||||| || |||||| ||||||||| Sbjct 15399 ATCGAGTTCAGCAAGACCAACATCCTGGGCACGCACGTGCTGCTGGAAGCCGCGAGGCTG 15458 Query 173222 TATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACG-----GCGAGA 173276 | ||| || || |||||||| | ||| || ||||| || |||| | |||| Sbjct 15459 CA---CGGGATCAAGAGGTTCATCCACGTGAGCACGGACGAGGTGTACGGAGAAGGGAGA 15515 Query 173277 GCAGTCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTCCCTCGAGCCAACAAACCCAT 173336 | | || ||| | || | || || || || ||||| || || ||||| | Sbjct 15516 CCCGACTCGGCTCCGATGACG-----GAAGATCA--TGT-GCTCGAACCCACCAACCCGT 15567 Query 173337 ATGCAGCAGCCAAGGCTGGTGCCGAAATGATGG-CACGTGCATATCACACATCGTACAAG 173395 | || || | |||||||| ||||| | ||| || | || | ||| || | | Sbjct 15568 ACGCGGCCACGAAGGCTGGCGCCGAGTTCCTGGTCAAGAGC-TTCCACCGCTCCTTCGGC 15626 Query 173396 CTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGAAAAA 173455 || || |||| | ||| | ||||||| ||||| || ||||| |||| |||||| || Sbjct 15627 CTCCCGACCATCATCACGAGGAGCAACAACGTGTACGGGCCGCACCAGTACCCCGAGAAG 15686 Query 173456 ATGATCCCAAAATTTAT 173472 | ||||| || ||||| Sbjct 15687 CTCATCCCCAAGTTTAT 15703 >seq706 Length=20588 Score = 105 bits (116), Expect = 1e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 || ||||| |||| | ||||||| ||| | ||||||||||||||||| | | | ||| Sbjct 7237 AGGGCGCCCAGCGCCGCGCGGTCCAGGTAATTCGTCGGCTCATCCAGCACCAGCAAGTGC 7178 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 |||| | ||||| ||| ||| | | || |||||||||||||| ||||| ||||| ||| Sbjct 7177 GGGCGGTTCCACATGGCCGCAGCGATGACGAGCTTCACCTTCTGGCCGCCTGAGAGACCG 7118 Query 224618 CGGATC 224623 |||||| Sbjct 7117 CGGATC 7112 >seq1022 Length=12964 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||| Sbjct 12910 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 12851 Query 84516 CCCAC 84520 ||||| Sbjct 12850 CCCAC 12846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921555847342440