Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq476 293 2e-74 seq4292 165 8e-36 seq4320 116 4e-21 seq45 109 5e-19 seq745 96.9 3e-15 seq6 96.9 3e-15 >seq476 Length=26050 Score = 293 bits (324), Expect = 2e-74 Identities = 1031/1586 (65%), Gaps = 62/1586 (4%) Strand=Plus/Minus Query 152999 CAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCA-CTTGAAACTCGCCCGCCAACA 153057 ||| | |||||| || | |||| ||||| ||| || | | |||| ||| || |||| || Sbjct 4543 CAGCTCAATGAGCTCCTTCATCAGGTACTTGTTCACGATCGTGAA-CTCACCGGCCAGCA 4485 Query 153058 CTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTT 153117 | || | || | ||| ||| | || || | ||| ||||| |||||||| || | Sbjct 4484 CACGGCGGTTGTACATGTTGGACGTGTAGGGCTCGATGGACTCGTTGTTGCCTAGGATCT 4425 Query 153118 GAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTC 153177 | ||||||| || || |||||| ||||||| || || || || | ||||| | Sbjct 4424 GGGCCGTGGAAGCCGTGGGCATGGGGGCCACCAGCAGCGAGTTGCGAAGACCGTGT--TT 4367 Query 153178 GA--ATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGA---CGGTGTCGCGTTCCA 153232 || | || ||||| | |||| ||| | ||| || |||| ||| || || ||| Sbjct 4366 GACCACGTTCTCCTTGAGCGCCGCCCAGTTCCAGAGACCCGAGGACGGGGTGACGCCCCA 4307 Query 153233 CATGTCGTACTGTAACA-CTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGC 153291 ||||||| |||| || | | ||| | ||||| || ||| ||||| |||| || Sbjct 4306 CATGTCGAACTGGAAGATCCCCTTG-CTGGCCGGCGAGCCCTGGAACGTCTCGTAGGGGC 4248 Query 153292 CGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCG 153350 || | | |||| | | || | | ||||| ||| | ||||| || || ||| | Sbjct 4247 CGAGCTCCTTGG-CAATCTCCATGGACGTCTCGACGGCGGCGTAGTAGATCGTCTCGAAG 4189 Query 153351 ATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAG 153410 || | || ||||| || || | ||||||||| ||| | || || | ||| Sbjct 4188 ATGTTCTTGTTGAGCTCGCGGGCCTGCTCGCTCTCGAACGCGTAGTTCATGAGGATGAAG 4129 Query 153411 GCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG--CT---GC 153465 ||||| || || ||||||| |||| ||||||||| || || | |||| || || Sbjct 4128 GCGTCCGCGAGGCCCTGGACGCCGATGCCGATGGGGCGGTGGCGCATGTTGGACTTGCGC 4069 Query 153466 GCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCA 153525 |||||| || | ||| |||| ||| ||||| | |||||||||||||| || Sbjct 4068 GCCTCG-----GCCACGGGGTAGTAGTTGACGTCGATGACCTTGTTGAGGTTGCGGGTCA 4014 Query 153526 CCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC--ATAGGTCATTTCGTCGACG--CGT 153581 |||| || || | | | | ||||||| | | || | | | | ||||| ||| | | Sbjct 4013 CCACCTTGGTGACCTCGTAGAGTTTCTGGTAGTCGAACACGCC--GTCGTCCACGAACTT 3956 Query 153582 ACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTG 153641 ||| || |||| || ||||| || || |||||| ||| |||| | || Sbjct 3955 GGGCAGCG--CCACG------GAGGCCAGGTTGCACACGGCCACCTCGTCGGGGGACGTG 3904 Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| || | |||| ||| ||||||||| | ||| ||| | || ||||| ||| Sbjct 3903 TACTCCATCACCTCGCAGCACAGGTTGCTGGAGCGGATGGTGCCGAGGTTCTGCTGGTTG 3844 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761 ||||| ||| |||||| ||| |||||||| | || |||| ||||||| |||| Sbjct 3843 GACTTGCGGTTGGCCGCGTCCTTGTAGAGCATGAAGGGCACGCCCGTCTCGATCTGCGCG 3784 Query 153762 TCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCG 153818 || | ||| |||| ||| | |||||| | || || |||||||||| Sbjct 3783 TCCAGGATGGCGAACC---ACAGCTGCTGCGCGTTGATGGTCTTGCGGGCGCGGCCCTCG 3727 Query 153819 CTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGA 153878 | |||||| ||||| || | |||||||||||| || |||| ||| ||| ||||| Sbjct 3726 CGCTCGTACTTGTCGTAGAGGCTCTCAAACTCGTCCCCCCAGCACTCGTAGAGCCCGGGG 3667 Query 153879 CACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGA 153938 || | || || | || |||| | ||| ||| | ||||| ||||||||| Sbjct 3666 GCCTCGTTGGGGCAGAACAAACTCCACTTGCCGTTGGCCTCCACGCGCTTCATGAACAGG 3607 Query 153939 TCCGGCACCCAGAGCGCGTACATGAGGTCGC--GCGCCTTGCA-ATCCTCCGCGCCCATG 153995 || |||||||| |||||||| | ||||||| || | |||| || | || | Sbjct 3606 TCGGGCACCCACAGCGCGTAGAACAGGTCGCGGGCACGGTGCAGCTCGTTGCCGTGGTTC 3547 Query 153996 TTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGC 154054 ||||| ||| | | | || | | | | ||||||||||||||| || | ||||| ||| Sbjct 3546 TTGCG---CAGGTCCAGGAACTCGA-ACACGTCGGCGTGCCAGGGCTCGAGGTAGATGGC 3491 Query 154055 CAGGGCACCTTTACGCTT---TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGAC 154111 | | || || ||||| |||||||| || |||| || || | | |||||| || Sbjct 3490 GAAGCTGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTACCGGGCCGTGTCGTTGAACAC 3431 Query 154112 GCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT----CGAATTGATCTTGCTGC 154167 ||||| |||||| | |||| | | || ||||||||| ||| || | |||| Sbjct 3430 GCGCAGCATGGGGATGATGCCGTTGGAGGAGCCGTTGGTGCCGCGA----ATGTAGCTGT 3375 Query 154168 CGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAG 154227 | ||| || | | |||| | | | ||| || || || | |||| || ||| | Sbjct 3374 TGGTGGCACGAATGTTGTGCATGCTGATGCCGATACCCCCCGCCCACTTGGAGATGCAGG 3315 Query 154228 CGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGA 154287 |||| | ||||| ||||| || |||||| ||||| | | | | | | || Sbjct 3314 CGCACTGCTTGAGCGTGTCATAGATACCCTCGATGGAGTCGTCCTGCATGGCCAATAGGA 3255 Query 154288 AACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCG 154347 | || || ||| |||||| ||||||| || ||| || || || ||||||||| Sbjct 3254 AGCAGGAGGACAGCTGCGGACGCGGCGTTCCGGCGTTAAACAGCGTCGGCGTCGCGTGCG 3195 Query 154348 TAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGT 154407 | || | || || ||| | |||||| || | ||| | | ||| || | || Sbjct 3194 TGAAGAACTTCTGCGACATGAGCTCGTACGTCTCCAGCGCGGCCTGGATGTCGGCCTTGT 3135 Query 154408 GAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAA 154467 | ||||| ||||| |||||||| | ||| ||||||||||| || | || | || | Sbjct 3134 GGATGCCCAGCGCCACGCGCATAATCATTTGCTGCGGACGCTCCACCACCTTGCCGTTTA 3075 Query 154468 TCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTA 154527 ||||| || || ||||| ||||| | ||||| || | ||| || || || Sbjct 3074 CGCGGAAGAGGTAGCCGCGCTCGAGTGTTTTAAACCCGAAGTAGTCGTACTCGAAGTCGC 3015 Query 154528 GCTCATGAGCGATGGCCGCATCGAGC 154553 | || || |||||||| | |||| Sbjct 3014 GGTCGTGGATGATGGCCGAGTTGAGC 2989 >seq4292 Length=2137 Score = 165 bits (182), Expect = 8e-36 Identities = 499/760 (66%), Gaps = 33/760 (4%) Strand=Plus/Plus Query 52093 ACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGA 52152 ||||||| | || |||||||||||| ||||||||||||| || ||| | || |||| Sbjct 141 ACGAGCGGTTCTTCATCAAGCACGTGCTGGCGTTCTTCGCTGCGAGCGACGGTATTGTGA 200 Query 52153 ACATTAACCTCATCGAGTACATGCAGCG--GAACGTTCCGGAACTCGAGGCGCAATACTT 52210 || ||||| | | || | |||| ||| || | || | ||||| | | ||| Sbjct 201 ACGAGAACCTGGCCATGAACTT-CAGCAATGAA-GTGCAGGTGCCCGAGGTCCGCTGCTT 258 Query 52211 TTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGA 52270 || || || | ||||||| | | ||| | ||| ||||| ||||||||||| Sbjct 259 CTACGGCTTCCAGATCGCCATCGAGAACATCCACGCCGAGGTGTACTCGCTGCTCATTGA 318 Query 52271 GCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACG-TGC 52329 | || || || | ||| ||| |||||| || ||||| ||| | | Sbjct 319 TACGTACATCAAGGACGCCGTGGAGAAGGACCACCTGCTGCGCGCCATCGAG-ACGATCC 377 Query 52330 CGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGA-----GAGCGACACCGC 52384 ||||||| || || || || ||||| | |||||| ||| | | | | || Sbjct 378 CGTGCGTGAAGAAGAAAGCGCACTGGGCGCTCAAGTGGTGCGACCCGCGTGTGTCGTCGT 437 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 | | ||||| || |||| |||||| || |||||| | || || || ||| Sbjct 438 ACC-----CGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGCTC 492 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 ||| | ||||||| | | || | | ||| | ||||| ||||||| ||| || Sbjct 493 CTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTGAGCTTCTCGAA 552 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC---TACTACAA 52561 |||| |||| || ||||| || ||||||||||||| ||||||||| |||| ||| Sbjct 553 CGAGCTGATCAGCCGTGACGAGGGTATGCACACGGACTTCGCGTGCCTCATGTACTCCAA 612 Query 52562 GACGCGCGTGACCGAAAAATTGGATTCGGACA----CGATCCTGAGCATGTTCAAGGAGG 52617 | | |||| | || || |||| | || | ||| ||| | | | | Sbjct 613 GCTG---GTGAAC---AAGCTGC---CGGAGAGCCGCGTGCACGAGATTGTGCGCG-ACG 662 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677 |||||| ||||| | ||||| | | | |||| || || |||||| | ||||||| Sbjct 663 CGGTGGTGATCGAGCACGAGTTCGTGCGCGACTCGCTCCCTGTGGAGCTGATCGGCATGA 722 Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 || || | ||||||| ||||||||||||| ||||| || |||||| || ||| | Sbjct 723 ACTCGGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGTCTGCTGTACTCGCTGG 782 Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | ||||||| || ||||| || ||||| || | ||| ||| || || || Sbjct 783 GTGTGCCAAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGACATGATCTCTCTCC 842 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||||||| ||||||||||| || |||||||| Sbjct 843 AGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTA 882 >seq4320 Length=1636 Score = 116 bits (128), Expect = 4e-21 Identities = 248/371 (67%), Gaps = 21/371 (6%) Strand=Plus/Minus Query 52476 GGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCAC 52535 ||| | ||||| || |||| ||| |||||| | || || |||||||| ||||| Sbjct 1595 GGCCTCATGCCTGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGAGACGAAGGTATGCAC 1536 Query 52536 ACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGA---------CCGAAAAATTGGAT 52586 |||||||| ||||||||| ||| || || ||| | |||||| | Sbjct 1535 ACGGACTTCGCGTGCCTCATGTACTCGAAGCTCGTCAACAAGCTGCCCGAAA-----GCC 1481 Query 52587 TCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACG 52646 || ||||| || | || | || ||||||| || || | ||||| | Sbjct 1480 GCGTGCACGA----GATCGTGCGC---GACGCGGTGGTGATTGAGCACGAGTTCGTGTGC 1428 Query 52647 GCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAG 52706 | ||||||| || ||||| | ||||||||| || | ||||||| ||||||||||| Sbjct 1427 GATTCGCTGCCTGTGGAGCTCATTGGCATGAACTCGGCGCTCATGTGCCAGTACATCGAG 1368 Query 52707 TTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAAT 52766 || |||||||| || ||| || || || | | ||| || ||||| || Sbjct 1367 TTCGTGGCGGACCGCCTGCTGTACTCACTGGGCGTGTCCAAGATCTACAACGTCAAGAAC 1308 Query 52767 CCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGA 52826 ||||| || | ||| ||| || ||||| |||||||||||||||| || |||||||| Sbjct 1307 CCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCTTTGAGAAGCGC 1248 Query 52827 GTCGGCGAGTA 52837 || |||||||| Sbjct 1247 GTGGGCGAGTA 1237 >seq45 Length=78880 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||| || || || || | Sbjct 57252 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCG 57193 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| |||||| || || | Sbjct 57192 AAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACG 57133 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||| | || |||||| || | ||| | ||| || || ||||| || || Sbjct 57132 TTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTC 57073 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 57072 ACGAAGATCTGCATG 57058 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||| || || || || | Sbjct 57024 GACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCAAGCTGCTTGCCAGCG 56965 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| |||||| || || | Sbjct 56964 AAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACG 56905 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||| | || |||||| || | ||| | ||| || || ||||| || || Sbjct 56904 TTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCGGTCAGCGTCTTC 56845 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 56844 ACGAAGATCTGCAT 56831 >seq745 Length=17434 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || ||||||||||| | || || ||||||||| || || |||| ||| Sbjct 12114 CCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 12055 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | | ||||| ||||| || || || || || ||||| |||||| || || | |||| Sbjct 12054 TCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATTTTCTGCTTGACATTG- 11996 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | | |||||| || |||||| || | ||| | || || || ||||| || || ||| Sbjct 11995 TCAATGCTGTCGGACGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACA 11936 Query 138604 AAAATCTGCATG 138615 || ||||||||| Sbjct 11935 AAGATCTGCATG 11924 >seq6 Length=256829 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| || | || | | |||||||| || |||||||||||||| Sbjct 246182 GCCACCACGCAGACGCAGCACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 246123 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||| || || || || || | |||| || ||||| ||||| || || Sbjct 246122 CAGCGTGCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGG 246063 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| || || || || | | || | | ||| | || |||||| Sbjct 246062 GATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCAC 246003 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | || || || ||||| || ||||| || |||||||| Sbjct 246002 GTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTTACGAAGATCTGCAT 245955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496226563651440