Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq758 392 4e-104 seq2056 246 4e-60 seq414 147 3e-30 seq6 143 4e-29 seq205 111 2e-19 seq745 104 3e-17 seq1417 96.9 5e-15 seq476 95.1 2e-14 >seq758 Length=17183 Score = 392 bits (434), Expect = 4e-104 Identities = 1049/1587 (66%), Gaps = 26/1587 (2%) Strand=Plus/Minus Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAG 195362 |||| || ||| | || || || ||||| || ||||| || ||||| ||||| || || | Sbjct 6215 TTGGCATTGATCTGGGCACGACCTACTCGTGCGTTGGCGTGTGGCAGAATGACCGCGTGG 6156 Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC-AGAT 195421 |||| ||| | |||||||| || ||||| || || || || || || ||||| || || | Sbjct 6155 AGATCATCGCCAATGACCAGGGCAACCGCACTACCCCGTCCTATGTGGCCTTCACGAGCT 6096 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || ||||| | || || ||||| || || ||| ||||||||| | ||| || Sbjct 6095 CG-GAGCGTCTGATCGGCGACGCCGCCAAGAACCAGGTGGCTATGAACGCCCACAACACG 6037 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 || || || | |||||| | || || ||||||||| | || |||| || || Sbjct 6036 GTGTTCGATGTCAAGCGTTTGATCGGCCGCAAGTTTACCGACGCAGAAGTGCAGTCGGAC 5977 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 || ||| ||||| | | |||| |||| ||| | | || ||| | | || | Sbjct 5976 ATCAAGCACTGGCCGTTCAAAGTGGTTCGCGGACCCGAGAACAAACCTCA-AGTGGTGGT 5918 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGAT 195660 | |||| || || || | || | ||||| || || ||||| |||||| | | Sbjct 5917 GCGGTTCAAGGGCGAAACCAAAACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTTGT 5858 Query 195661 TAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720 |||||| |||| || || ||| ||| ||||| ||||| |||| || ||||| Sbjct 5857 CAAGATGCGAGAGATCGCCGAGGCTTACATCGGTAAGCAAGTGAAGAATGCCGTGGTGAC 5798 Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 || || || || |||| ||||| || || || || || |||||||| | ||||| || Sbjct 5797 GGTCCCAGCGTATTTCAACGATTCGCAGCGCCAAGCCACGAAGGACGCCGGGGCTATCGC 5738 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || ||| || | || |||||||| || || || ||||| ||||| || || || Sbjct 5737 TGGGCTGAACGTGCTGCGTATCATCAATGAGCCGACCGCTGCTGCCATTGCGTACGGGCT 5678 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 ||||||| |||| || || | || || ||||||||||||| || || || ||||| Sbjct 5677 GGACAAG---AAGGGCGGTGAGCACAACGTGCTGATCTTTGATCTGGGAGGCGGGACGTT 5621 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||||||||| || || | ||||||| || || ||||| || ||||| || || || || Sbjct 5620 TGATGTCTCGCTGCTTACGATTGAAGAAGGCATCTTCGAGGTGAAGGCGACGGCGGGCGA 5561 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCT-CCGTCATTTGTCTGATGAGT 196019 ||||||||| ||||| ||||| || ||| |||||| | || || ||| |||| Sbjct 5560 TACTCATCTGGGTGGCGAAGACTTTGATAATCGTCTTGTAGAGTTCTTCGTC-ACCGAGT 5502 Query 196020 TCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGA 196079 || || || | | || ||| | | | || | | || | ||||| || | | Sbjct 5501 TCAAGCGCAAATACCACAAGGATCTGACAGTGAACTCACGTGCGATGCGTCGTCTCCGTA 5442 Query 196080 CTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTG 196139 | || | || || || || || ||||| || || |||| ||| | | ||||| | Sbjct 5441 CAGCGTCCGAGCGCGCGAAGCGTACTCTGTCCACTTCGGCGCAAGCGTACCTGGAGATCG 5382 Query 196140 ATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGT 196199 ||||| |||| ||||| || || ||| | | || ||||| ||||| || ||||| || Sbjct 5381 ATTCGCTGTTAGACGGCATCGATTTCAACTCGACCATTACTCGTGCTCGATTTGAGGATC 5322 Query 196200 TAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAA 196259 | | || || ||| | ||| |||| | ||||| | || || || || ||| | | Sbjct 5321 TCTGCAACGAGTTCTTTCGCAAGACTATGAATCCTGTGGCGCAGGTTCTGCGCGACTCCA 5262 Query 196260 AGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGA 196319 || || ||| |||| | || | ||| | || ||||| || || || || |||| Sbjct 5261 AGCTGTCGAAGAACCAGGTGAACGAGGTGGTCTTGGTCGGAGGGTCGACTCGCATCCCGA 5202 Query 196320 AGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAAC 196378 || | || ||| || || | | |||||||||| || || | ||| ||||||| Sbjct 5201 AGGTGCAGCAGTTG-TTGATGGACTTCTTCAATGGCAAGGAGCTGTTCAAGTCGATCAAT 5143 Query 196379 CCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC 196438 || ||||||||||| || || ||||| |||| || || || || || || ||| Sbjct 5142 CCTGATGAAGCAGTCGCCTACGGTGCCACCGTGCAAGCCGCCATCCTGAGTGGCAACGAC 5083 Query 196439 AATAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491 | | ||||||| ||||| || ||||| || || || || |||| || || Sbjct 5082 --TCGT--CGTCCAAGTTGCAGGATCTGCTACTACTGGACGTGGCTCCGTTATCGCTAGG 5027 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 || || || || || ||||| ||||| || | || | ||||| || ||||| | Sbjct 5026 CCTGGAGACCGCCGGCGGTGTCATGACGAAGCTCATCCCGCGTAACACCACCATTCCTTC 4967 Query 196552 TAAGAAGGAAC-AAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 ||||| ||| |||| || || ||||| |||| || || | || || ||||| Sbjct 4966 CAAGAA--AACGCAGTCGTTCTCGACGTACGCCGACAACCAGTCTGGAGTGTTGATTCAG 4909 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | ||| || || ||| | | || || ||||| || || | || || || Sbjct 4908 GTGTTTGAGGGCGAGCGCACGATGACCCGTGACAATCATCTTCTGGGCAAGTTTAATCTG 4849 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 || || || | || | ||||| || |||||| | || ||||| || || Sbjct 4848 GACGGCATCCCGCCCATGCCTCGTGGTGTGCCGCAGATTGACGTGACGTTCGACATCGAT 4789 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 | || || || || ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 4788 GTCAACGGCATCCTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATC 4729 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||| || ||||||||||| || || || ||| || || || || ||||| || Sbjct 4728 ACGATCACGAATGACAAGGGCCGACTGTCGCAGGCTGACATCGATCGCATGGTCGCCGAC 4669 Query 196850 GCGGAAAAGTACAGGGAAGAAGACGAG 196876 ||||| ||||||| ||| | |||||| Sbjct 4668 GCGGAGAAGTACAAGGACCAGGACGAG 4642 >seq2056 Length=5722 Score = 246 bits (272), Expect = 4e-60 Identities = 467/684 (68%), Gaps = 5/684 (1%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 || ||||| | || || || ||||| || |||||||| ||||| || ||||| || ||| Sbjct 5027 GGCATCGACCTCGGCACGACCTACTCGTGCGTTGGTGTCTGGCAGAACGATCGCGTGGAG 5086 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || || || |||||||| ||||| || || Sbjct 5087 ATCATCGCCAACGACCAGGGCAACCGCACCACCCCGTCGTACGTGGCCTTCACGGACTCG 5146 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 ||||| || | || || ||||| || || ||| || ||||| | ||| || || Sbjct 5147 GAACGCCTGATCGGCGACGCCGCCAAGAACCAGGTGGCCATGAATGCACACAACACGGTG 5206 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 || ||||| ||||| || || || |||||||| || ||| | || || | ||| || Sbjct 5207 TTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCTCCGATCCGGTGGTGCAGGCCGACATC 5266 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGG-TGTGGCTGATAAGCCTATGATTAATGTTGA 195603 ||| ||||| | | | ||| || ||| | | ||| ||||| ||| | || | Sbjct 5267 AAGCACTGGCCGT-TCAAGCTGACGTCGGGTCCCGGTGACAAGCCGCAGATCACGGTGCA 5325 Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 || | || |||| || || ||||| || || ||||| |||||| |||| || Sbjct 5326 GTTCAAGGGCGAGACCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAA 5385 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||| || || ||||||| || || || || | || || | || || Sbjct 5386 GATGCGCGAGGTGGCCGAGGCTTTCATCGGCAAGGAGGTCAAGAACGCCGTGATCACGGT 5445 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 ||| || ||||||| || || || || |||||||| |||||||| | || ||||| || Sbjct 5446 ACCCGCCTACTTCAACGACTCGCAGCGTCAGGCGACCAAGGACGCCGGCGCCATTGCCGG 5505 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 ||| ||| || | || ||||| ||||| || || ||||| || || || || ||||| Sbjct 5506 TCTGAACGTCCTGCGTATCATCAACGAACCCACGGCCGCTGCCATCGCCTACGGCCTGGA 5565 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || || || |||||||||| || || || || || || || Sbjct 5566 CAAG---AAGGGCGGCGAGCGCAACGTGCTGATCTTTGACCTGGGCGGAGGCACCTTCGA 5622 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 ||| || || | | || || | || || ||||| || ||||| || || || || || Sbjct 5623 TGTGTCGCTCTTGAGCATCGAGGAGGGCATCTTCGAGGTGAAGGCCACCGCCGGCGACAC 5682 Query 195964 TCATCTAGGTGGTGAAGATTTCGA 195987 ||| | || || || || ||||| Sbjct 5683 GCATTTGGGCGGCGAGGACTTCGA 5706 Score = 141 bits (156), Expect = 1e-28 Identities = 526/821 (64%), Gaps = 5/821 (1%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || ||||| | || || || || || ||||| || || || || || | || Sbjct 113 GCGCTGCGGCGGCTGCGCACGGCGTGCGAGCGCGCCAAGCGTACGCTGTCGTCGTCAGCA 172 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || | | ||||| || ||| ||| ||||| | |||||| | | || || || Sbjct 173 CAGGCGTACATCGAGATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGACCATCACG 232 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 || || || || || || | | |||| || | ||| ||||| ||||| || Sbjct 233 CGCGCGCGGTTCGAGGATCTGTGCGGAGATTACTTCCGCAAGACCATGGAGCCTGTGGAG 292 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || |||||||| ||| | ||| | |||| |||| | || || ||||| Sbjct 293 AAGGTGCTGCGTGACGCCAAGCTATCCAAGAGTCAGGTGCATGAGGTGGTGCTCGTGGGC 352 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 ||||| || ||||| || ||| | || ||| |||| || ||||||||| || || Sbjct 353 GGATCGACGCGTATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTCAACGGCAAGGAG 412 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| ||||||||||||| || || || || || || || | || ||||| || Sbjct 413 CCCAACAAGTCGATCAACCCGGACGAGGCCGTCGCGTACGGCGCCACGGTGCAGGCGGCC 472 Query 196421 ATTCTCTCAGGTGTTGAC---AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 || || || ||| | || | || || | ||||| || || || | Sbjct 473 ATCCTGAGCGGCAACGACTCGTCGGACAAGCTGCAGGACTTGCTGCTGCTGGACGTGACG 532 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || |||||||| || || || |||||||| ||||| | | || | | ||| Sbjct 533 CCTCTGTCGCTGGGTCTGGAGACGGCCGGTGGTGTCATGACCACTCTGATCGCCCGTAAC 592 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || | ||||| |||||| || || || ||||| |||| || || || ||| Sbjct 593 ACGACGGTGCCGACCAAGAAGTCGCAGACGTTCTCCACGTACGCCGACAACCAGCCTGGT 652 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | || || || | || || || |||||| | || ||| | ||||| || Sbjct 653 GTGCTCATCCAGGTGTTCGAGGGCGAGCGCTCCATGACCCGTGACAACAACCTACTGGGC 712 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||| | || || || || | || | || || || ||||| | || | Sbjct 713 AAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGCGGCGTGCCGCAGATCGACGTGACC 772 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| || ||||| || || || || ||||| | || | ||| ||| | | || ||| Sbjct 773 TTCGACATTGACGCGAACGGCATCCTGAACGTGTCGGCCGTGGAGAAGTCGAC-GGGAAA 831 Query 196778 TCTGAA-AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836 ||| ||||| ||| || || |||||||| || || ||| ||| || || || || Sbjct 832 GGAGAACAAGATCACGATCACGAACGACAAGGGCCGCCTCTCTCAGGCCGAGATCGACCG 891 Query 196837 TATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||||| || || || ||||||| | || ||||||| Sbjct 892 CATGGTGGCGGAGGCCGAGAAGTACAAGTCGGAGGACGAGG 932 >seq414 Length=29178 Score = 147 bits (162), Expect = 3e-30 Identities = 525/820 (64%), Gaps = 3/820 (0%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || ||||| | || || || || || ||||| || || || || || | || Sbjct 29066 GCGCTGCGGCGGCTGCGCACGGCGTGCGAGCGCGCCAAGCGTACGCTGTCGTCGTCAGCA 29007 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || | | ||||| || ||| ||| ||||| | |||||| | | || || || Sbjct 29006 CAGGCGTACATCGAGATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGACCATCACG 28947 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 || || || || || || | | |||| || | ||| ||||| ||||| || Sbjct 28946 CGCGCGCGGTTCGAGGATCTGTGCGGAGATTACTTCCGCAAGACCATGGAGCCTGTGGAG 28887 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || |||||||| ||| | ||| | |||| |||| | || || ||||| Sbjct 28886 AAGGTGCTGCGTGACGCCAAGCTATCCAAGAGTCAGGTGCATGAGGTGGTGCTCGTGGGC 28827 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 ||||| || ||||| || ||| | || ||| |||| || ||||||||| || || Sbjct 28826 GGATCGACGCGTATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTCAACGGCAAGGAG 28767 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| ||||||||||||| || || || || || || || | || ||||| || Sbjct 28766 CCCAACAAGTCGATCAACCCGGACGAGGCCGTCGCGTACGGCGCCACGGTGCAGGCGGCC 28707 Query 196421 ATTCTCTCAGGTGTTGAC---AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 || || || ||| | || | || || | || || || || || | Sbjct 28706 ATCCTGAGCGGCAACGACTCGTCGGACAAGCTGCAGGACTTGCTTCTGCTGGACGTGACG 28647 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || |||||||| || || || |||||||| ||||| | | || | | ||| Sbjct 28646 CCTCTGTCGCTGGGTCTGGAGACGGCCGGTGGTGTCATGACCACTCTGATCGCCCGTAAC 28587 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || | ||||| |||||| || || || ||||| |||| || || || ||| Sbjct 28586 ACGACGGTGCCGACCAAGAAGTCGCAGACGTTCTCCACGTACGCCGACAACCAGCCTGGT 28527 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | || || || | || || || |||||| | || ||| | || || || Sbjct 28526 GTGCTCATCCAGGTGTTCGAGGGTGAGCGCTCCATGACCCGTGACAACAACCTGCTGGGC 28467 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||| | || || || || | || | |||||||| ||||| | || | Sbjct 28466 AAGTTCAACCTGGACGGCATCCCGCCCATGCCTCGTGGTGTTCCCCAGATCGACGTGACC 28407 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| || ||||| || || || || ||||| | || | ||| ||| | | ||||| Sbjct 28406 TTCGACATTGACGCGAACGGCATCCTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAG 28347 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | ||||| ||| || || |||||||| || || || ||| || ||||| || Sbjct 28346 GAGAACAAGATCACGATCACGAACGACAAGGGCCGTCTGTCCCAGGCTGACATTGACCGC 28287 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 |||||| || || || ||||||| | || ||||||| Sbjct 28286 ATGGTTGCCGAGGCCGAGAAGTACAAGTCGGAGGACGAGG 28247 >seq6 Length=256829 Score = 143 bits (158), Expect = 4e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || || || || ||||| ||||| || ||| |||| Sbjct 245955 ATGCAGATCTTCGTAAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTCG 246014 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || |||||||| || ||||| ||||| || || || ||| Sbjct 246015 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 246074 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||||||||| || || || || || |||||| Sbjct 246075 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 246134 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||||| || || | || || ||||| Sbjct 246135 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 246181 >seq205 Length=60388 Score = 111 bits (122), Expect = 2e-19 Identities = 385/590 (65%), Gaps = 12/590 (2%) Strand=Plus/Minus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| ||||||| || ||||| || ||||| || || |||||||| || ||| | || Sbjct 31866 AAGTCGGAGGTTGACGAGATTGTGCTGGTGGGCGGCTCCACCCGTATCCCCAAGGTGCAG 31807 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT-TAAACAAAACGATCAACCCGGAT 196384 ||| || | | || || |||||| || || | | | | ||||| ||| Sbjct 31806 CAGCTGAT--CAAGGACTACTTCAACGGCAAGGAGCCTTCGCGCGGTG-TGAACCCCGAT 31750 Query 196385 GAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAAT 196444 ||||| || || || || || ||||| |||| | ||| ||| |||| || | Sbjct 31749 GAAGCCGTCGCCTACGGCGCTGCCGTGCAGGGCGGTATCCTCAGCGGTGAG--CAGGACG 31692 Query 196445 AAC-GTCCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAG 196502 | | | ||||| | | || || ||||||| | || | |||| |||| |||| || | Sbjct 31691 ACCTGACCAAGGACGTGCTTCTGATTGATGTGGTGCCTCTGTCCCAGGGTATTGAGACCG 31632 Query 196503 CGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAAC 196562 ||| ||||| ||||| || | || | | ||||| || ||||| |||||| | Sbjct 31631 TGGGCGGTGTCATGACCAAGCTGATCAACCGTAACACTGTGATCCCGACCAAGAAGTCGC 31572 Query 196563 AAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAG 196622 | ||| || || || || || || || | ||| | || || || | ||| || | Sbjct 31571 AGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTGATCCAGGTGTTTGAGGGTG 31512 Query 196623 AACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCA 196681 | || | || || | ||||| |||| ||| || || | ||||| | || || | || Sbjct 31511 AGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTAACTGGCCTGCCG 31453 Query 196682 GCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATT 196741 |||| || | || || || |||||| | || ||||| || ||||| || || || Sbjct 31452 CCTGCCCCGCGTGGCGTGCCCCAGATTGAGGTGACGTTCGAGATTGACGCCAACGGTATC 31393 Query 196742 CTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAAT 196801 || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 31392 CTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCACTGCC 31333 Query 196802 GACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 31332 GAGAAGGGCCGTCTGTCCCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 31283 >seq745 Length=17434 Score = 104 bits (114), Expect = 3e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 11925 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 11984 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||| ||||| || || || ||| Sbjct 11985 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 12044 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| || || || || || ||| | || |||||| Sbjct 12045 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 12104 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 12105 ATCCAGAAGG 12114 >seq1417 Length=8357 Score = 96.9 bits (106), Expect = 5e-15 Identities = 212/316 (67%), Gaps = 9/316 (3%) Strand=Plus/Plus Query 198580 CGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTC 198639 |||| || || || || || || ||| | ||| ||||| ||| | | || |||| Sbjct 1844 CGGGCACGGGCAAGACGCTGCTGGCTAGAGCTGTCGCGTCCGAAGCCGGGGTGGCCTTCT 1903 Query 198640 TTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCC 198699 | |||||||| || |||| |||||||| |||| ||| ||||| | | || | Sbjct 1904 TGTTTTGCTCCGCCTCGGATTTCGTCGAGATGCTCGTGGGTCGAGGTGCGGCGAGGGTGC 1963 Query 198700 GGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTG 198759 | || ||||| ||| || | | | || || ||||| |||||||||||||| | Sbjct 1964 GAGACCTCTTCACGCAGGCCTCGCAGCACCCACAGTGCATCATTTTCATTGATGAGATCG 2023 Query 198760 ACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGA 198819 | || | | |||| ||| |||||| | || || | || ||||| || ||||||| Sbjct 2024 ATGCGCTGGCTAAGGCGCGCGGTGGA-----TTCAACTCG-AACGATGAACGAGAGCAGA 2077 Query 198820 CGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGG 198876 || | || || || ||||| |||||||| || || || |||| | ||| || | | Sbjct 2078 CGCTGAATCAACTACTCACGGAGATGGACGGGTTCGAGGGGAATGTCAATGGAGTCATCG 2137 Query 198877 TGATTGCTGCTACAAA 198892 | ||||| ||||| || Sbjct 2138 TCATTGCAGCTACCAA 2153 >seq476 Length=26050 Score = 95.1 bits (104), Expect = 2e-14 Identities = 243/367 (66%), Gaps = 5/367 (1%) Strand=Plus/Plus Query 78050 CACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTC 78109 ||||| || || || ||||||| || || || || ||||| ||| |||| || || ||| Sbjct 3197 CACGCGACGCCGACGCTGTTTAACGCCGGAACGCCGCGTCCGCAGCTGTCCTCCTGCTTC 3256 Query 78110 CTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCT 78169 ||| | || | |||| ||||| || | ||||| || | || |||| |||| || Sbjct 3257 CTATTGGCCATGCAGGACGACTCCATCGAGGGTATCTATGACACGCTCAAGCAGTGCGCC 3316 Query 78170 CAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCAT-ATTCACGATGTTCGTGCAAACAA 78228 || || |||||||| || ||||| || | ||| || ||| | ||||||| | ||| Sbjct 3317 TGCATCTCCAAGTGGGCGGGGGGTATCGG-CATCAGCATGCACAACATTCGTGCCACCAA 3375 Query 78229 GTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATT 78288 | ||| | || || || || || | || || || || ||||| | || || Sbjct 3376 CAGCTACATTCGCGGCACCAACGGCTCCTCCAACGGCATCATCCCCATGCTGCGCGTGTT 3435 Query 78289 CAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTAT 78345 ||| | || || || || || |||| | || | | | ||||| ||||| || Sbjct 3436 CAACGACACGGCCCGGTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCAGCTTCGCCAT 3495 Query 78346 GTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGG 78405 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 3496 CTACCTCGAGCCCTGGCACGCCGACGTGTTCGAGTTCCTGGACCTGCGCAAGAACCACGG 3555 Query 78406 TGACGAG 78412 ||||| Sbjct 3556 CAACGAG 3562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657814894111440