Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314365.1_202015-10- 14] 5,777 sequences; 53,691,444 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq476 612 2e-170 seq4292 233 2e-56 seq4320 120 3e-22 seq20 87.8 2e-12 >seq476 Length=26050 Score = 612 bits (678), Expect = 2e-170 Identities = 1194/1736 (69%), Gaps = 72/1736 (4%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCG----AGACATA 19173 ||||| || ||| | |||||||| | |||| ||| || ||||| |||| || Sbjct 3113 ATGCGCGTGGCGCTGGGCATCCACAAGGCCGACATCC----AGGCCGCGCTGGAGACGTA 3168 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 ||| || ||| ||||||||||||||||||||||||||||| || || |||||||| || Sbjct 3169 CGAGCTCATGTCGCAGAAGTTCTTCACGCACGCGACGCCGACGCTGTTTAACGCCGGAAC 3228 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | |||||| |||| ||| |||||| |||| ||| |||| ||| ||| ||||| Sbjct 3229 GCCGCGTCCGCAGCTGTCCTCCTGCTTCCTATTGGCCATGCAGGACGACTCCATCGAGGG 3288 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||| || ||||||||| ||||||| ||||||||||||| | ||||||||||| || Sbjct 3289 TATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCGGGGGGTATCGGCAT 3348 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGTGGTACA-CGA-ATCAATGGGACGAACGGAGTAGC 19410 | | ||| | || || || | | ||| | | || || || ||||| | Sbjct 3349 CAGCATGCAC-AACATTCGTGCCACCA--ACAGCTACATTCGCGGCACCAACGGCTCCTC 3405 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 | |||| ||| |||| ||||| ||||| |||||| |||||||| ||||||| ||||||| Sbjct 3406 CAACGGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGGTACGTGGACCAGGG 3465 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 |||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| | Sbjct 3466 CGGCGGCAAGCGCAAGGGCAGCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTGTT 3525 Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGT---CGCGACCT 19587 || ||||| || |||||| |||||| || ||||| ||| | || |||||||| Sbjct 3526 CGAGTTCCTGGACCTGCGCAAGAACCACGGCAACGAGC---TGCACCGTGCCCGCGACCT 3582 Query 19588 CTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATG 19647 ||| || ||||| | || ||||| |||||| || || ||| ||| | || Sbjct 3583 GTTCTACGCGCTGTGGGTGCCCGACCTGTTCATGAAGCGCGTGGAGGCCAACGGCAAGTG 3642 Query 19648 GCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAA 19707 | || | ||||| |||| ||| || || ||| || || || | ||| | Sbjct 3643 GAGTTTGTTCTGCCCCAACGAGGCCCCCGGGCTCTACGAGTGCTGGGGGGACGAGTTTGA 3702 Query 19708 TGAGT-TGTACCGGACTTACGTAGCCC-AGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGG 19765 ||| | ||| | |||| ||| | ||||||| | ||| || || | | Sbjct 3703 -GAGCCTCTACGACAAGTACG-AGCGCGAGGGCCGCGCCCGCAAGACCATCAACGCGCAG 3760 Query 19766 GACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTAC 19825 | | ||| | | |||| | ||| ||||||| ||| || | |||| |||| Sbjct 3761 CAGCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACGGGCGTGCCCTTCATGCTCTAC 3820 Query 19826 AAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAAC 19885 |||||||| || ||| |||||| || ||| ||||| ||||| | ||| || |||| Sbjct 3821 AAGGACGCGGCCAACCGCAAGTCCAACCAGCAGAACCTCGGCACCATCCGCTCCAGCAAC 3880 Query 19886 CTGTGTACTGAAATCATGGAGGTTTCCAAG---CCGGACGAGACTGCCGTGTGTAATCTG 19942 ||||| || | |||||| | || | || |||||| |||||||| || ||| Sbjct 3881 CTGTGCTGCGAGGTGATGGAG---TACACGTCCCCCGACGAGGTGGCCGTGTGCAACCTG 3937 Query 19943 GCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 || ||| || ||||| | ||||| | | | | ||||||| ||| | ||| Sbjct 3938 GCCTCCGTGGCGCTGCCCAAGTTCGTGGACGACGGCGTGTTCGACTACCAGAAACTCTAC 3997 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| ||| ||| || || || || || || |||||||| |||| ||||| Sbjct 3998 GAGGTCACCAAGGTGGTGACCCGCAACCTCAACAAGGTCATCGACGTCAACTACTACCC- 4056 Query 20063 ACCGAGGC---GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAG 20119 || ||| |||||||||||| || ||||||||||| || |||| |||||||||||| Sbjct 4057 --CGTGGCCGAGGCGCGCAAGTCCAACATGCGCCACCGCCCCATCGGCATCGGCGTCCAG 4114 Query 20120 GGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGA---CGATCCCAAGGCGCGC 20176 ||||| || |||| ||||| | | | | | ||||| ||| | |||| ||| Sbjct 4115 GGCCTCGCGGACGCCTTCATCCTCATGAACTACGCGTTCGAGAGCGAGC---AGGCCCGC 4171 Query 20177 GAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC--- 20233 |||||||||||| |||||||||| | | ||| |||| ||| || || ||| | Sbjct 4172 GAGCTCAACAAGAACATCTTCGAGACGATCTACTACGCCGCCGTC---GAGACGTCCATG 4228 Query 20234 GAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGT 20293 || | ||||| ||| |||||| |||||||||||| |||| ||||| || | |||| Sbjct 4229 GAGATTGCCAAGGAGCTCGGCCCCTACGAGACGTTCCAGGGCTCGCCGGCCAGCAAGGGG 4288 Query 20294 ATCCTCCAGCCGGACATGTGGGGCGTCA--CTGAGAATGAGT-TTTGGAGC------GCC 20344 ||| ||||| |||||||||||||||| | | | || | |||| | || Sbjct 4289 ATCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCCTCGGGTCTCTGGAACTGGGCGGCG 4348 Query 20345 CTCAAGGTTGAGATCAAG---ACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401 |||||| |||| | | | ||||| |||||||||||| |||| || || |||||| Sbjct 4349 CTCAAG---GAGAACGTGGTCAAACACGGTCTTCGCAACTCGCTGCTGGTGGCCCCCATG 4405 Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461 || || || || || ||||||||| | || ||||||||| | ||||||| |||||| || Sbjct 4406 CCCACGGCTTCCACGGCCCAGATCCTAGGCAACAACGAGTCCATCGAGCCCTACACGTCC 4465 Query 20462 AACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTC 20521 ||||| ||| || ||| ||||||||||||||| || || |||||| ||||| | Sbjct 4466 AACATGTACAACCGCCGTGTGCTGGCCGGTGAGTTCACGATCGTGAACAAGTACCTGATG 4525 Query 20522 CGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAG 20579 || | || | | || ||| | ||| | | ||| | || || ||| Sbjct 4526 AAGGAGCTCATTGAGCTGGGCATCTGGACACCCGACGTGCGCAATCAGATCCTGAACGA- 4584 Query 20580 CCGGCGGGAGCGTCC---AGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGA 20636 |||||| ||| | ||| || |||||| | || ||||||| | |||| || Sbjct 4585 -CGGCGGCTCCGTGCAGAAGGTGAAGGCCATCCCCGATCACGTCAAGGAGAAGTACAAGA 4643 Query 20637 CCGTATGGGAAATCCCACAGAAGAGCA-TCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695 | || ||||| ||| |||||| ||| | | ||| || ||||||| ||||| |||||| Sbjct 4644 CGGTGTGGGAGATCAAGCAGAAG-GCAGTACTGGACTTGTCGGCCGACCGCGGTGCCTAC 4702 Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755 || |||| ||||||||||| || ||| | | |||| | | ||||| | Sbjct 4703 ATTTGCCAGAGTCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCACG 4762 Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 || ||||| | |||| |||| | |||||||||||||| ||||||||||| |||| Sbjct 4763 TCGATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCG 4818 Score = 578 bits (640), Expect = 4e-160 Identities = 1180/1724 (68%), Gaps = 48/1724 (3%) Strand=Plus/Minus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| ||||||||||| |||||||| ||||||||||| |||| | |||||| || Sbjct 4818 CGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTG 4759 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 |||||| | |||||| | ||| ||||||||||||||| |||| ||||| Sbjct 4758 AGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTAG 4699 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 |||||||||||||||| || ||| | || | ||| ||| |||||||| | ||| | Sbjct 4698 GCACCGCGGTCGGCCGACAAGTCCAGTACTGCCTTCTGCTTGATCTCCCACACCGTCTTG 4639 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTT---GTACGCTCCCACCGGCTCGC 78429 || | |||| | | || ||||| || | | | | ||| || ||| | | Sbjct 4638 TACTTCTCCTTGACGTGATCGGGGATGGCCTTCACCTTCTGCACGGAGCCGCCGTCGTTC 4579 Query 78430 ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAA---GATCCCGGACC 78486 | || | ||| | | || ||||| || | || || | ||| | | Sbjct 4578 AGGATCTGATTGCGCACGTCGGGTGTCCAGA---TGCCCAGCTCAATGAGCTCCTTCATC 4522 Query 78487 AGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTC 78546 |||| | ||| | || |||||| |||||||| ||||| ||| ||||||| | Sbjct 4521 AGGTACTTGTTCACGATCGTGAACTCACCGGCCAGCACACGGCGGTTGTACATGTTGGAC 4462 Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 ||||| ||||||| | ||||||||| || | ||||||||| || || || || |||||| Sbjct 4461 GTGTAGGGCTCGATGGACTCGTTGTTGCCTAGGATCTGGGCCGTGGAAGCCGTGGGCATG 4402 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGA---CCTTTAG---- 78659 || || ||||| || || || |||||||| || |||| | || |||| || Sbjct 4401 GGGGCCACCAGCAGCGAGTTGCGAAGACCGTGT---TTGACCACGTTCTCCTTGAGCGCC 4345 Query 78660 GCC--GTCCCAAAATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATACCC 78714 ||| || ||| | | | || | | ||||||||||| || | ||| ||| Sbjct 4344 GCCCAGTTCCAGAGACCCGAGGACGGGGTGACGCCCCACATGTCGAACTGGAAGATCCCC 4285 Query 78715 TCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT 78774 | | |||||||| |||| |||||||||||| | || ||||||||| | || ||| Sbjct 4284 TTGCTGGCCGGCGAGCCCTGGAACGTCTCGTAGGGGCCGAGCTCCTTGGCAATCTC-CAT 4226 Query 78775 G-AC-TCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCG 78832 | || || | | ||| |||| ||| | | |||||||||| ||||||||||||||| | Sbjct 4225 GGACGTCTCG-ACGGCGGCGTAGTAGATCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGG 4167 Query 78833 CCTTGGTCTCG-TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891 ||| | || | ||||||| | | | |||||| | || || |||||||||||| Sbjct 4166 CCT-GCTCGCTCTCGAACGCGTAGTTCATGAGGATGAAGGCGTCCGCGAGGCCCTGGACG 4108 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAA 78948 ||||| |||| || ||||||||||||||| ||| || |||||||| | ||||| Sbjct 4107 CCGATGCCGATGGGGCGGTGGCGCATGTTGGACTTGCG---CGCCTCGGCCACGGGGTAG 4051 Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAAT 79008 |||| |||||||| ||| ||||| || || || ||| || |||||||| | | Sbjct 4050 TAGTTGACGTCGATGACCTTGTTGAGGTTGCGGGTCACCACCTTGGTGACCTCGTAGAGT 3991 Query 79009 TTGGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTT 79067 || | | || || | | || | | ||| | || || || || |||||||| Sbjct 3990 TTCTGGTAGTCGAACACGCCGTCGTCC-ACGAACTTGGGCAGCGCCACGGAGGCCAGGTT 3932 Query 79068 GCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGA 79127 |||||||||| |||||| ||| | ||| || | || ||||| || || Sbjct 3931 GCACACGGCCACCTCGTCGGGGGACGTGTACTCCATCACCTCGCAGCACAGGTTGCTGGA 3872 Query 79128 CTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACAT 79187 ||||||||||| ||||| ||||||| ||| ||| |||||||||||| ||| Sbjct 3871 GCGGATGGTGCCGAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCTTGTAGAGCAT 3812 Query 79188 GTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCG 79247 | | ||| || ||||| | ||| | || | | || ||| | | | | || Sbjct 3811 GAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCTGCTGCGCGTT 3752 Query 79248 GACAACCTTCTTGTACCGACCCTGTGCGA-CGTACGTCCGGTACAA-CTCGTTGAAAGCC 79305 || ||| | || |||| ||| ||||| | ||| | ||| | || | Sbjct 3751 GATGGTCTTGCGGGCGCGGCCCTC-GCGCTCGTACTTGTCGTAGAGGCTC-TCAAACTCG 3694 Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 ||||| || ||| || || ||| ||||| ||||| | || ||| | || Sbjct 3693 TCCCCCCAGCACTCGTAGAGCCCGGGGGCCTCGTTGGGGCAGAACAAACTCCACTTGCCG 3634 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||| || || |||||| ||||| || | |||||| || ||| ||||||||| Sbjct 3633 TTGGCCTCCACGCGCTTCATGAACAGGTCGGGCACCCACAGCGCGTAGAACAGGTCGCGG 3574 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | ||||| ||| |||||| ||||| || || || || | | ||||||| Sbjct 3573 GCACGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAACACGTCGGCG 3514 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || ||||||||||| ||||||||||||||||||||||||| ||| Sbjct 3513 TGCCAGGGCTCGAGGTAGATGGCGAAGCTGCCCTTGCGCTTGCCGCCGCCCTGGTCCACG 3454 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 ||||||||||||| |||||| || || |||||||| | |||||||| || | |||||| Sbjct 3453 TACCGGGCCGTGTCGTTGAACACGCGCAGCATGGGGATGATGCCGTTGGAGGAGCCGTTG 3394 Query 79606 GTCCCGTTGAT-TCG-TGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 || ||| || | | ||| | | || |||||||| | ||| | ||| ||||| ||| Sbjct 3393 GTGCCGCGAATGTAGCTGTT--GGTGGCACGAATGTT-GTGCATGCTGATGCCGATACCC 3337 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 || | ||||||||||||| ||||||| ||||||||| || ||||| |||||||| ||| Sbjct 3336 CCCGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGATACCCTCGATGGAG 3277 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 ||||||| ||| || | ||||||||| |||| ||| || ||| |||||||| Sbjct 3276 TCGTCCTGCATGGCCAATAGGAAGCAGGAGGACAGCTGCGGACGCGGCGTTCCGGCGTTA 3217 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTG 79842 || || |||||||||||||||||||||||||| || ||| || |||||||||||| Sbjct 3216 AACAGCGTCGGCGTCGCGTGCGTGAAGAACTTCTGCGACATGAGCTCGTACGTCTCCAGC 3157 Query 79843 ACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 || | ||| |||| | ||||||||| | ||| |||||||| Sbjct 3156 GCGGCCTGGATGTCGGCCTTGTGGATGCCCAGCGCCACGCGCAT 3113 >seq4292 Length=2137 Score = 233 bits (258), Expect = 2e-56 Identities = 569/848 (67%), Gaps = 27/848 (3%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | || |||||| | | ||||||| | ||||| | |||| Sbjct 54 TGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACC 113 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| || || | || |||||| | ||||||||| || ||||| | Sbjct 114 TCAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCGT 173 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| ||||| || || ||||||| || || | | ||||||||| ||| || | Sbjct 174 TCTTCGCTGCGAGCGACGGTATTGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAG 233 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | |||||| ||| | ||||||| | ||| ||| || |||| |||||| Sbjct 234 TGCAGGTGCCCGAGGTCCGCTGCTTCTACGGCTTCCAGATCGC-CATCGAGAACATCCAC 292 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 ||||| ||||||||| | || |||| || ||||||| | | ||||||| Sbjct 293 GCCGAGGTGTACTCGCTGCTCATTGATACGTACATCAAGGACGCCGTGGAGAAGGACCAC 352 Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 ||| | || ||||| |||||| |||| || || || | ||||| | ||||| | | Sbjct 353 CTGCTGCGCGCCATCGAGACGATCCCGTGC-GTGAAGAAGAAAGCGCACTGGGCGCTCAA 411 Query 59951 GTGGATGAGTCCTG---GAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGG 60006 |||| || | || | | | | || | | | ||||| | || || || ||||| Sbjct 412 GTGG-TGCGACCCGCGTGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGG 470 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || || |||||||| ||||| ||||| | || ||||||||||| ||||| ||||||| Sbjct 471 AGGGCATTTTCTTCTCGGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCA 530 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| |||||||| ||||| ||||||||||| ||| |||||||| | || ||| | Sbjct 531 TGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGTATGCACACGGACT 590 Query 60127 TTGCAGTGACGC-TCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATA------TT 60179 | || ||| | | | || || | || || | || || || ||| | | Sbjct 591 TCGC-GTGCCTCATGTACTCCAAGCTGGTGAACAA----GCTGCC--GGAGAGCCGCGTG 643 Query 60180 CACAAGATTGT--TCAGTGGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTC 60237 ||| ||||||| | | | | |||| | ||| ||||||| | || |||| | Sbjct 644 CACGAGATTGTGCGCGACGCGGTGGTGA--TCGAGCACGAGTTCGTGCGCGACTCGCTCC 701 Query 60238 CATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGG 60297 | | || || || ||| || | | ||| |||||||| |||| || || | Sbjct 702 CTGTGGAGCTGATCGGCATGAACTCGGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCG 761 Query 60298 ACCGCCTCATGGCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACT 60357 |||| || || | | | || | | || ||| |||||| ||||| ||||||| Sbjct 762 ACCGTCTGCTGTACTCGCTGGGTGTGCCAAAGATCTACAACGTGAAGAACCCGTTCGACT 821 Query 60358 GGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATT 60417 ||||||| | ||||| | | || |||||||||||||| |||||||| || || || | Sbjct 822 GGATGGACATGATCTCTCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGT 881 Query 60418 ATTCAAAG 60425 | || ||| Sbjct 882 ACTCCAAG 889 >seq4320 Length=1636 Score = 120 bits (132), Expect = 3e-22 Identities = 281/414 (68%), Gaps = 14/414 (3%) Strand=Plus/Minus Query 60019 TCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGA 60078 |||| ||||||||||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct 1636 TCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGA 1577 Query 60079 GTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGC 60138 | ||||| |||||||| || ||| ||||| || | || ||| || || ||| | | Sbjct 1576 GCTTCTCGAACGAGCTCATCAGCCGAGACGAAGGTATGCACACGGACTTCGC-GTGCCTC 1518 Query 60139 -TCTATTCACACCTATTGGAAAAA-TGCCCTTCCAAGGATATT-CACAAGATTGTTCAGT 60195 | || || | || | | || ||||| ||| | ||| |||| || | Sbjct 1517 ATGTACTCGAAGCTCGTCAACAAGCTGCCCGA--AAGCCGCGTGCACGAGATCGTGCGCG 1460 Query 60196 GGGC--TTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGG 60253 || | |||| | ||| ||||||| | || |||| || | ||||| || Sbjct 1459 ACGCGGTGGTGA--TTGAGCACGAGTTCGTGTGCGATTCGCTGCCTGTGGAGCTCATTGG 1402 Query 60254 TATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCA 60313 ||| || | | ||| |||||||| |||| || ||||||||||| || | Sbjct 1401 CATGAACTCGGCGCTCATGTGCCAGTACATCGAGTTCGTGGCGGACCGCCTGCTGTACTC 1342 Query 60314 GTTTGGAGAAGGACCAA--TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATC 60371 | || | | |||| | ||| ||| || ||||| |||||||||||||| | ||| Sbjct 1341 ACTGGGCGT--GTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGATC 1284 Query 60372 TCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 ||| || | || ||||||||||||||||||||||| || || || || || ||| Sbjct 1283 TCGCTGCAGGGCAAGACCAACTTCTTTGAGAAGCGCGTGGGCGAGTACTCCAAG 1230 >seq20 Length=109563 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 159479 CGCTTCTGGGGGTCGCTCAGGACCTCATAGGCCTCCTGGACTTTCTTGAACTTCTCGGCG 159538 ||||||| ||||| || ||||| |||||| || || |||||||| ||| | | Sbjct 38391 CGCTTCTCCGGGTCCGAGAGCACCTCGTAGGCCACCGTGATGGTCTTGAACAGCTCCGGG 38332 Query 159539 TCACCGCCCTTGTCGGGGTGGTGCTCGCGGGCAAGTTTGCGGTACGCCTTTTTGATGTCG 159598 || ||||||||||| ||||||| || | | || || |||||||| ||||| ||||| ||| Sbjct 38331 TCGCCGCCCTTGTCCGGGTGGTTCTTGAGCGCCAGCTTGCGGTAGGCCTTCTTGATCTCG 38272 Query 159599 G 159599 | Sbjct 38271 G 38271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548485189652880