Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1003 98.7 1e-15 >seq1003 Length=13646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 83255 CGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGC 83314 || |||||| |||||||| || || | || |||||||||||| |||||| |||| Sbjct 11013 CGGAGGAAGTTGAAGAGCGCGTGCGCGTTGGCGCCGTTGACCTCGACCTTCTCCGTGAGC 11072 Query 83315 ATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCG 83374 || ||| |||||||||||| || || || |||| |||| |||| | ||||||| Sbjct 11073 ATGAAGGCCGGCTCGAAGCCCTTGCCGGGGCGGATGTGCCGCAGGCTCTGGTAGATCTCC 11132 Query 83375 GCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 | | | ||| |||||||| ||||||||||| |||||| Sbjct 11133 TCGCCGTTGAGGTTCTCCTGGTGGCCGAACTGGTTGCACGGG 11174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608749085550800