Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq86 82.4 6e-11 >seq86 Length=66527 Score = 82.4 bits (90), Expect = 6e-11 Identities = 94/120 (78%), Gaps = 6/120 (5%) Strand=Plus/Minus Query 99663 TTTCTTTTGACCCATGCGATGTATGCGGTCTTGCGCTTGCAGCTCAATTTGCGGGTTCCA 99722 ||||||||| || |||||||| ||| |||||||||| || ||| ||||||||||||| Sbjct 15904 TTTCTTTTGTCCGATGCGATGACAGCGTGCTTGCGCTTGAAGGTCATTTTGCGGGTTCCA 15845 Query 99723 AT-GCGGCTCCAACATGATTA-TGTGATTGCCGCCGACCAAATTTAAT-CCCACACCGCC 99779 || || | || | || |||| ||| |||||||| | || ||||| ||||||||||| Sbjct 15844 ATCGCTG-TCATAAATAATTACAGTGTCTGCCGCCGTC--AAGTTAATGCCCACACCGCC 15788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425311497072400