Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq761 392 4e-104 seq14 149 8e-31 seq118 114 2e-20 seq710 109 7e-19 seq752 105 9e-18 seq498 95.1 2e-14 >seq761 Length=18355 Score = 392 bits (434), Expect = 4e-104 Identities = 1049/1587 (66%), Gaps = 26/1587 (2%) Strand=Plus/Minus Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAG 195362 |||| || ||| | || || || ||||| || ||||| || ||||| ||||| || || | Sbjct 7391 TTGGCATTGATCTGGGCACGACCTACTCGTGCGTTGGCGTGTGGCAGAATGACCGCGTGG 7332 Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC-AGAT 195421 |||| ||| | |||||||| || ||||| || || || || || || ||||| || || | Sbjct 7331 AGATCATCGCCAATGACCAGGGCAACCGCACTACCCCGTCCTATGTGGCCTTCACGAGCT 7272 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 || ||||| | || || ||||| || || ||| ||||||||| | ||| || Sbjct 7271 CG-GAGCGTCTGATCGGCGACGCCGCCAAGAACCAGGTGGCTATGAACGCCCACAACACG 7213 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 || || || | |||||| | || || ||||||||| | || |||| || || Sbjct 7212 GTGTTCGATGTCAAGCGTTTGATCGGCCGCAAGTTTACCGACGCAGAAGTGCAGTCGGAC 7153 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 || ||| ||||| | | |||| |||| ||| | | || ||| | | || | Sbjct 7152 ATCAAGCACTGGCCGTTCAAAGTGGTTCGCGGCCCCGAGAACAAACCTCA-AGTGGTGGT 7094 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGAT 195660 | |||| || || || | || | ||||| || || ||||| |||||| | | Sbjct 7093 GCGGTTCAAGGGCGAAACCAAAACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTTGT 7034 Query 195661 TAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720 |||||| |||| || || ||| ||| ||||| ||||| |||| || ||||| Sbjct 7033 CAAGATGCGAGAGATCGCCGAGGCTTACATCGGTAAGCAAGTGAAGAATGCCGTGGTGAC 6974 Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 || || || || |||| ||||| || || || || || |||||||| | ||||| || Sbjct 6973 GGTCCCAGCGTATTTCAACGATTCGCAGCGCCAAGCCACGAAGGACGCCGGGGCTATCGC 6914 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || ||| || | || |||||||| || || || ||||| ||||| || || || Sbjct 6913 TGGGCTGAACGTGCTGCGTATCATCAATGAGCCGACCGCTGCTGCCATTGCGTACGGGCT 6854 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 ||||||| |||| || || | || || ||||||||||||| || || || ||||| Sbjct 6853 GGACAAG---AAGGGCGGTGAGCACAACGTGCTGATCTTTGATCTGGGAGGCGGGACGTT 6797 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||||||||| || || | ||||||| || || ||||| || ||||| || || || || Sbjct 6796 TGATGTCTCGCTGCTTACGATTGAAGAAGGCATCTTCGAGGTGAAGGCGACGGCGGGCGA 6737 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCT-CCGTCATTTGTCTGATGAGT 196019 ||||||||| ||||| ||||| || ||| |||||| | || || ||| |||| Sbjct 6736 TACTCATCTGGGTGGCGAAGACTTTGATAATCGTCTTGTAGAGTTCTTCGTC-ACCGAGT 6678 Query 196020 TCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGA 196079 || || || | | || ||| | | | || | | || | ||||| || | | Sbjct 6677 TCAAGCGCAAATACCACAAGGATCTGACAGTGAACTCACGTGCGATGCGTCGTCTCCGTA 6618 Query 196080 CTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTG 196139 | || | || || || || || ||||| || || |||| ||| | | ||||| | Sbjct 6617 CAGCGTCCGAGCGCGCGAAGCGTACTCTGTCCACTTCGGCGCAAGCGTACCTGGAGATCG 6558 Query 196140 ATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGT 196199 ||||| |||| ||||| || || ||| | | || ||||| ||||| || ||||| || Sbjct 6557 ATTCGCTGTTAGACGGCATCGATTTCAACTCGACCATTACTCGTGCTCGATTTGAGGATC 6498 Query 196200 TAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAA 196259 | | || || ||| | ||| |||| | ||||| | || || || || ||| | | Sbjct 6497 TCTGCAACGAGTTCTTTCGCAAGACTATGAATCCTGTGGCGCAGGTTCTGCGCGACTCCA 6438 Query 196260 AGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGA 196319 || || ||| |||| | || | ||| | || ||||| || || || || |||| Sbjct 6437 AGCTGTCGAAGAACCAGGTGAACGAGGTGGTCTTGGTCGGAGGGTCGACTCGCATCCCGA 6378 Query 196320 AGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAAC 196378 || | || ||| || || | | |||||||||| || || | ||| ||||||| Sbjct 6377 AGGTGCAGCAGTTG-TTGATGGACTTCTTCAATGGCAAGGAGCTGTTCAAGTCGATCAAT 6319 Query 196379 CCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC 196438 || ||||||||||| || || ||||| |||| || || || || || || ||| Sbjct 6318 CCTGATGAAGCAGTCGCCTACGGTGCCACCGTGCAAGCCGCCATCCTGAGTGGCAACGAC 6259 Query 196439 AATAATAACGTCCAA-------GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491 | | ||||||| ||||| || ||||| || || || || |||| || || Sbjct 6258 --TCGT--CGTCCAAGTTGCAGGATCTGCTACTACTGGACGTGGCTCCGTTATCGCTAGG 6203 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 || || || || || ||||| ||||| || | || | ||||| || ||||| | Sbjct 6202 CCTGGAGACCGCCGGCGGTGTCATGACGAAGCTCATCCCGCGTAACACCACCATTCCTTC 6143 Query 196552 TAAGAAGGAAC-AAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 ||||| ||| |||| || || ||||| |||| || || | || || ||||| Sbjct 6142 CAAGAA--AACGCAGTCGTTCTCGACGTACGCCGACAACCAGTCTGGAGTGTTGATTCAG 6085 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | ||| || || ||| | | || || ||||| || || | || || || Sbjct 6084 GTGTTTGAGGGCGAGCGCACGATGACCCGTGACAATCATCTTCTGGGCAAGTTTAATCTG 6025 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 || || || | || | ||||| || |||||| | || ||||| || || Sbjct 6024 GACGGCATCCCGCCCATGCCTCGTGGTGTGCCGCAGATTGACGTGACGTTCGACATCGAT 5965 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 | || || || || ||||| | || | ||| ||| | | ||||| | ||||| Sbjct 5964 GTCAACGGCATCCTGAACGTGTCGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATC 5905 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||| || ||||||||||| || || || ||| || || || || ||||| || Sbjct 5904 ACGATCACGAATGACAAGGGCCGACTGTCGCAGGCTGACATCGATCGCATGGTCGCCGAC 5845 Query 196850 GCGGAAAAGTACAGGGAAGAAGACGAG 196876 ||||| ||||||| ||| | |||||| Sbjct 5844 GCGGAGAAGTACAAGGACCAGGACGAG 5818 Score = 244 bits (270), Expect = 1e-59 Identities = 703/1073 (66%), Gaps = 9/1073 (1%) Strand=Plus/Plus Query 195356 CGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTT 195415 || || ||||| ||| | || ||||| || ||||| || || || |||||||| ||||| Sbjct 1 CGCGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCGTCGTACGTGGCCTTC 60 Query 195416 ACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATC 195475 || || ||||| || | || || ||||| || || ||| || ||||| | | Sbjct 61 ACGGACTCGGAACGCCTGATCGGCGACGCCGCCAAGAACCAGGTGGCCATGAATGCACAC 120 Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535 || || || || ||||| ||||| || || || |||||||| || ||| | || || Sbjct 121 AACACGGTGTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCTCCGATCCGGTGGTGCAG 180 Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGG-TGTGGCTGATAAGCCTATGAT 195594 | ||| || ||| ||||| | | | ||| || ||| | | ||| ||||| ||| Sbjct 181 GCCGACATCAAGCACTGGCCGT-TCAAGCTGACGTCGGGTCCCGGTGACAAGCCGCAGAT 239 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | || | || | || |||| || || ||||| || || ||||| ||||| Sbjct 240 CACGGTGCAGTTCAAGGGCGAGACCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGT 299 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGT 195714 | |||| |||||| ||| || || ||||||| || || || || | || || Sbjct 300 GCTGATCAAGATGCGCGAGGTGGCCGAGGCTTTCATCGGCAAGGAGGTCAAGAACGCCGT 359 Query 195715 TGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGC 195774 | || || || || ||||||| || || || || |||||||| |||||||| | || Sbjct 360 GATCACGGTGCCCGCCTACTTCAACGACTCGCAGCGTCAGGCGACCAAGGACGCCGGCGC 419 Query 195775 TATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTA 195834 ||||| ||||| ||| || | || ||||| ||||| || || ||||| || || || Sbjct 420 CATTGCCGGTCTGAACGTCCTGCGTATCATCAACGAACCCACGGCCGCTGCCATCGCCTA 479 Query 195835 TGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || ||||||||| |||| || || || || |||||||||| || || || || Sbjct 480 CGGCCTGGACAAG---AAGGGCGGCGAGCGCAACGTGCTGATCTTTGACCTGGGCGGAGG 536 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 || || ||||| || || | | || || | || || ||||| || ||||| || || Sbjct 537 CACCTTCGATGTGTCGCTCTTGAGCATCGAGGAGGGCATCTTCGAGGTGAAGGCCACCGC 596 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTG 196013 || || || ||| | || || || || ||||| || || || || ||||| Sbjct 597 CGGCGACACGCATTTGGGCGGCGAGGACTTCGACAACCGCCTGGTCGAGTACTTTGT-GC 655 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGA-AATCCTAGGGCTCTTCGTCGG 196072 | ||||||| | || | || ||| | || | || | | || || | ||| Sbjct 656 AGGAGTTCCAATGTGAGCACCGCAAGGAT-CTGATGCAGAACCAGCGCGCCCTGCAGCGG 714 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 || | || || || || || ||||| || || || || || | | || | | Sbjct 715 CTGCGCACGGCGTGCGAGCGCGCCAAGCGTACGCTGTCGTCGTCAACACAGGCGTACATC 774 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 ||||| || ||| ||| ||||| | |||||| | | || || || || || || || Sbjct 775 GAGATCGACTCGCTGTACGACGGCGTGGACTTCAACTCGACCATCACGCGCGCGCGGTTC 834 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 || || | | |||| || | ||| ||||| ||||| || | || || ||| Sbjct 835 GAGGATCTGTGCGGAGATTACTTCCGCAAGACCATGGAGCCTGTGGAGAAGGTGCTGCGT 894 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 ||||| ||| | ||| | |||| |||| | || || ||||| ||||| || ||| Sbjct 895 GACGCCAAGCTATCCAAGAGTCAGGTGCATGAGGTGGTGCTCGTGGGCGGATCGACGCGT 954 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 || || ||| | || ||| |||| || ||||||||| || || ||||| || Sbjct 955 ATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTCAACGGCAAGGAGCCCAACAAGTCG 1014 Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 ||||||||||| || || || || || || || | || ||||| || || || Sbjct 1015 ATCAACCCGGACGAGGCCGTCGCGTACGGCGCCACGGTGCAGGCGGCCATCCT 1067 >seq14 Length=110323 Score = 149 bits (164), Expect = 8e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| ||||| || ||| |||| Sbjct 100908 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACCATCACGCTCGACGTGGAGCCGTCG 100967 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || |||||||| || ||||| ||||| || || || ||| Sbjct 100968 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 101027 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || ||||| || ||||||||||| || || || || || |||||| Sbjct 101028 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACGCTGAGCGACTACAAC 101087 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||||| || || | || || ||||| Sbjct 101088 ATCCAGAAGGAGTCTACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 101134 >seq118 Length=60094 Score = 114 bits (126), Expect = 2e-20 Identities = 386/590 (65%), Gaps = 12/590 (2%) Strand=Plus/Plus Query 196268 AAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAA 196327 ||||| ||||||| || ||||| || ||||| || || |||||||| || ||| | || Sbjct 28227 AAGTCGGAGGTTGACGAGATTGTGCTGGTGGGCGGCTCCACCCGTATCCCCAAGGTGCAG 28286 Query 196328 CAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT-TAAACAAAACGATCAACCCGGAT 196384 ||| || | | || || |||||| || || | | | | ||||| ||| Sbjct 28287 CAGCTGAT--CAAGGACTACTTCAACGGCAAGGAGCCTTCGCGCGGTG-TGAACCCCGAT 28343 Query 196385 GAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAAT 196444 ||||| || || || || || ||||| |||| | ||| ||| |||| || | Sbjct 28344 GAAGCCGTCGCCTACGGCGCTGCCGTGCAGGGCGGTATCCTCAGCGGTGAG--CAGGACG 28401 Query 196445 AAC-GTCCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAG 196502 | | | ||||| | | || || ||||||| | || | |||| |||| |||| || | Sbjct 28402 ACCTGACCAAGGACGTGCTTCTGATTGATGTGGTGCCTCTGTCCCAGGGTATTGAGACCG 28461 Query 196503 CGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAAC 196562 ||| ||||| ||||| || | || | | ||||| || ||||| |||||| | Sbjct 28462 TGGGCGGTGTCATGACCAAGCTGATCAACCGTAACACTGTGATCCCGACCAAGAAGTCGC 28521 Query 196563 AAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAG 196622 | ||| || || || || || || || | ||| | || || || | ||| || | Sbjct 28522 AGACCTTCTCGACCTACCAGGACAACCAGCCCGCTGTGCTGATCCAGGTGTTTGAGGGTG 28581 Query 196623 AACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCA 196681 | || | || || | ||||| |||| ||| || || | ||||| |||| || | || Sbjct 28582 AGCG-TGCCATGACCAAGGACAACCGTCTTCTGGGCAAGTTCGAGCTGACTGGCCTGCCG 28640 Query 196682 GCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATT 196741 |||| || | || || || |||||| | || ||||| || ||||| || || || Sbjct 28641 CCTGCCCCGCGTGGCGTGCCCCAGATTGAGGTGACGTTCGAGATCGACGCCAACGGTATC 28700 Query 196742 CTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAAT 196801 || | || | ||||||||||||| | ||||| | || | ||| ||| || Sbjct 28701 CTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCACGATCACTGCC 28760 Query 196802 GACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || ||||| || || || ||||||| || || || ||||| || || || Sbjct 28761 GAGAAGGGCCGTCTGTCCCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 28810 >seq710 Length=19765 Score = 109 bits (120), Expect = 7e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || ||||| || || || ||| |||| Sbjct 5513 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 5454 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||| ||||| || || || ||| Sbjct 5453 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 5394 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | || |||||| Sbjct 5393 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 5334 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 5333 ATCCAGAAGG 5324 >seq752 Length=18659 Score = 105 bits (116), Expect = 9e-18 Identities = 214/316 (68%), Gaps = 9/316 (3%) Strand=Plus/Plus Query 198580 CGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTTTC 198639 |||| || || || || || || ||| | ||| ||||| ||| | | || |||| Sbjct 9383 CGGGCACGGGCAAGACGCTGCTGGCTAGAGCTGTCGCGTCCGAAGCCGGGGTGGCCTTCT 9442 Query 198640 TTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCC 198699 | |||||||| || |||| |||||||| |||| ||| ||||| | | || | Sbjct 9443 TGTTTTGCTCCGCCTCGGATTTCGTCGAGATGCTCGTGGGTCGAGGTGCGGCGAGGGTGC 9502 Query 198700 GGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGATGAGATTG 198759 | || ||||| ||| || | | | || || ||||| |||||||||||||| | Sbjct 9503 GAGACCTCTTCACGCAGGCCTCGCAGCACCCACAGTGCATCATTTTCATTGATGAGATCG 9562 Query 198760 ACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCGTGAGCAGA 198819 | || | | |||| ||| |||||| | || || | || ||||| || ||||||| Sbjct 9563 ATGCGCTGGCTAAGGCGCGCGGTGGA-----TTCAACTCG-AACGATGAACGAGAGCAGA 9616 Query 198820 CGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA---CAATGAGACTGGTATCGTGG 198876 || | || || || ||||| |||||||| || ||||| |||| | ||| || | | Sbjct 9617 CGCTGAATCAACTACTCACGGAGATGGACGGGTTTGAGGGGAATGTCAATGGAGTCATCG 9676 Query 198877 TGATTGCTGCTACAAA 198892 | ||||||||||| || Sbjct 9677 TCATTGCTGCTACCAA 9692 >seq498 Length=26695 Score = 95.1 bits (104), Expect = 2e-14 Identities = 243/367 (66%), Gaps = 5/367 (1%) Strand=Plus/Plus Query 78050 CACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTC 78109 ||||| || || || ||||||| || || || || ||||| ||| |||| || || ||| Sbjct 3886 CACGCGACGCCGACGCTGTTTAACGCCGGAACGCCGCGTCCGCAGCTGTCCTCCTGCTTC 3945 Query 78110 CTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCT 78169 ||| | || | |||| ||||| || | ||||| || | || |||| |||| || Sbjct 3946 CTATTGGCCATGCAGGACGACTCCATCGAGGGTATCTATGACACGCTCAAGCAGTGCGCC 4005 Query 78170 CAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCAT-ATTCACGATGTTCGTGCAAACAA 78228 || || |||||||| || ||||| || | ||| || ||| | |||| || | ||| Sbjct 4006 TGCATCTCCAAGTGGGCGGGGGGTATCGG-CATCAGCATGCACAACATTCGCGCCACCAA 4064 Query 78229 GTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATT 78288 | ||| |||| || || || || | || || || || ||||| | || || Sbjct 4065 CAGCTACATTCGAGGCACCAACGGCTCCTCCAACGGCATCATCCCCATGCTGCGCGTGTT 4124 Query 78289 CAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGGGGTCATTCGCTAT 78345 ||| | || || || || || |||| | || | | | ||||| ||||| || Sbjct 4125 CAACGACACGGCCCGGTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCAGCTTCGCCAT 4184 Query 78346 GTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGG 78405 ||||| || || ||||||||||| || | || || |||| || || ||||| || Sbjct 4185 CTACCTCGAGCCCTGGCACGCCGACGTGTTCGAGTTCCTGGACCTGCGCAAGAACCACGG 4244 Query 78406 TGACGAG 78412 ||||| Sbjct 4245 CAACGAG 4251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657810840034400